Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G430300.1 | Wheat | nucleus | 75.24 | 87.57 |
| TraesCS5A01G428400.1 | Wheat | nucleus | 74.76 | 86.52 |
| TraesCS5D01G436400.1 | Wheat | nucleus | 74.27 | 85.96 |
| HORVU5Hr1G104360.1 | Barley | nucleus | 58.74 | 73.33 |
| HORVU5Hr1G103980.1 | Barley | nucleus | 50.0 | 69.13 |
| Os03t0793000-01 | Rice | nucleus | 39.81 | 48.52 |
| OQU90855 | Sorghum | nucleus | 41.75 | 47.78 |
| HORVU2Hr1G036250.1 | Barley | nucleus | 33.01 | 43.04 |
| HORVU5Hr1G104240.1 | Barley | nucleus, peroxisome, plastid | 33.5 | 42.86 |
| AT4G14225.1 | Thale cress | cytosol, mitochondrion, plastid | 25.73 | 42.4 |
| HORVU3Hr1G067990.1 | Barley | cytosol, nucleus, plastid | 27.67 | 42.22 |
| CDX90265 | Canola | cytosol | 26.21 | 41.54 |
| Bra010753.1-P | Field mustard | cytosol | 26.21 | 41.54 |
| CDY65025 | Canola | cytosol | 25.73 | 40.77 |
| GSMUA_Achr9P07600_001 | Banana | nucleus | 27.67 | 40.43 |
| HORVU2Hr1G022940.2 | Barley | cytosol, peroxisome | 33.5 | 40.35 |
| HORVU7Hr1G050270.1 | Barley | nucleus | 31.07 | 39.75 |
| Zm00001d034389_P001 | Maize | peroxisome | 31.07 | 39.75 |
| GSMUA_Achr9P17970_001 | Banana | cytosol, mitochondrion, nucleus | 27.18 | 39.72 |
| PGSC0003DMT400088043 | Potato | cytosol | 25.24 | 38.52 |
| PGSC0003DMT400086587 | Potato | nucleus | 22.82 | 37.9 |
| PGSC0003DMT400097759 | Potato | cytosol | 24.76 | 37.78 |
| KRH38756 | Soybean | nucleus, plastid | 28.16 | 37.42 |
| KRH09258 | Soybean | cytosol, extracellular, nucleus, plastid | 25.73 | 37.32 |
| Solyc07g055090.1.1 | Tomato | cytosol, nucleus, peroxisome | 23.79 | 37.12 |
| CDY49709 | Canola | cytosol | 22.33 | 35.11 |
| Bra019169.1-P | Field mustard | cytosol | 22.33 | 35.11 |
| CDY57287 | Canola | cytosol | 22.33 | 33.82 |
| VIT_16s0022g01980.t01 | Wine grape | nucleus | 24.76 | 33.55 |
| CDX92701 | Canola | cytosol | 21.84 | 33.33 |
| VIT_01s0011g02290.t01 | Wine grape | nucleus | 24.76 | 33.12 |
| AT4G25380.1 | Thale cress | nucleus | 20.39 | 32.31 |
| HORVU1Hr1G032850.1 | Barley | nucleus | 22.33 | 29.87 |
| HORVU5Hr1G072920.1 | Barley | plastid | 31.07 | 25.7 |
| VIT_16s0022g01680.t01 | Wine grape | nucleus | 24.27 | 20.92 |
| Os03t0793300-01 | Rice | nucleus | 15.53 | 13.5 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | UniProt:A0A287SJU8 | InterPro:AN1-like_Znf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:HORVU5Hr1G103940 | EnsemblPlants:HORVU5Hr1G103940.1 |
| InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 | PFAM:PF01754 | PFscan:PS51036 |
| PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF40 | SMART:SM00154 | SMART:SM00259 | SUPFAM:SSF118310 |
| SUPFAM:SSF57716 | UniParc:UPI000B47B175 | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr5H:+:617746926..617747751
Molecular Weight (calculated)
21538.5 Da
IEP (calculated)
8.783
GRAVY (calculated)
-0.291
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: NNRRRAPWPR SHADHAPLGR VGGAMAHNAA AATPQKRKYT ETEEEETAGL CANGCGFFGA AATGNLCSKC YRDHVFAAGV DTMATASVFI DPDRSTALPP
101: AKKARMTVAV PSSESDGAAA CSAAAAVAAD PAVTPVKQPA VAANRCAACR KKVGLLGFRC RCEGTFCSVH RHSEKHDCGF DFKAAGQEQI AKHNPVVVAD
201: KMSGRI
101: AKKARMTVAV PSSESDGAAA CSAAAAVAAD PAVTPVKQPA VAANRCAACR KKVGLLGFRC RCEGTFCSVH RHSEKHDCGF DFKAAGQEQI AKHNPVVVAD
201: KMSGRI
001: MGSEENNSTS FPPTEPKLCD NGCGFFGSPS NMNLCSKCYR SLRAEEDQTA VAKAAVKNSL KLPSCSIIAP GQKHPLEIKP AHLETVVVTA EPSSVPVAAE
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
Arabidopsis Description
SAP7SAP7 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.