Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G093390.2 | |
| HORVU3Hr1G027650.2 | |
| HORVU3Hr1G054240.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G12630.1 | HORVU1Hr1G093390.2 | AT2G42580.1 | 19000166 |
| AT3G12630.1 | HORVU3Hr1G027650.2 | AT2G42580.1 | 19000166 |
| AT3G12630.1 | HORVU3Hr1G054240.2 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G146400.1 | Wheat | nucleus | 96.27 | 90.64 |
| TraesCS7A01G245100.1 | Wheat | nucleus | 95.65 | 90.06 |
| TraesCS7D01G243700.1 | Wheat | nucleus | 95.65 | 89.53 |
| Os08t0504700-01 | Rice | cytosol, nucleus, plastid | 73.29 | 69.41 |
| OQU80949 | Sorghum | cytosol, nucleus, plastid | 72.67 | 66.48 |
| Zm00001d031423_P001 | Maize | cytosol, nucleus, plastid | 69.57 | 63.64 |
| GSMUA_Achr3P11070_001 | Banana | nucleus | 53.42 | 55.48 |
| VIT_18s0001g00430.t01 | Wine grape | nucleus | 22.98 | 55.22 |
| VIT_18s0001g01260.t01 | Wine grape | nucleus | 22.98 | 55.22 |
| GSMUA_Achr9P19860_001 | Banana | nucleus | 51.55 | 53.55 |
| CDY00788 | Canola | cytosol, nucleus, plastid | 48.45 | 50.32 |
| CDY52666 | Canola | nucleus | 48.45 | 50.32 |
| Bra034748.1-P | Field mustard | nucleus | 49.69 | 50.31 |
| KRH13914 | Soybean | cytosol, nucleus, plastid | 50.31 | 50.31 |
| CDY50536 | Canola | nucleus | 48.45 | 50.0 |
| Bra038739.1-P | Field mustard | nucleus | 48.45 | 50.0 |
| CDY08419 | Canola | nucleus | 49.07 | 49.69 |
| KRH43492 | Soybean | cytosol, nucleus, plastid | 50.31 | 49.39 |
| AT3G12630.1 | Thale cress | nucleus | 49.07 | 49.38 |
| CDY67538 | Canola | nucleus | 48.45 | 49.06 |
| CDX73811 | Canola | nucleus | 47.83 | 48.43 |
| Bra001461.1-P | Field mustard | nucleus | 47.2 | 47.8 |
| KRH27497 | Soybean | cytosol, nucleus, plastid | 37.89 | 45.19 |
| VIT_13s0064g01220.t01 | Wine grape | nucleus | 47.83 | 44.77 |
| KRH20843 | Soybean | plastid | 37.89 | 44.53 |
| HORVU5Hr1G072920.1 | Barley | plastid | 68.32 | 44.18 |
| Solyc01g086960.2.1 | Tomato | nucleus | 51.55 | 44.15 |
| PGSC0003DMT400017570 | Potato | nucleus | 50.31 | 43.32 |
| HORVU3Hr1G067990.1 | Barley | cytosol, nucleus, plastid | 34.16 | 40.74 |
| HORVU5Hr1G104240.1 | Barley | nucleus, peroxisome, plastid | 40.37 | 40.37 |
| HORVU5Hr1G103980.1 | Barley | nucleus | 35.4 | 38.26 |
| VIT_06s0004g01790.t01 | Wine grape | nucleus | 33.54 | 38.03 |
| PGSC0003DMT400061226 | Potato | cytosol, nucleus, plastid | 36.65 | 37.11 |
| Solyc12g100060.1.1 | Tomato | cytosol, nucleus, plastid | 36.65 | 36.88 |
| HORVU1Hr1G032850.1 | Barley | nucleus | 34.78 | 36.36 |
| HORVU2Hr1G036250.1 | Barley | nucleus | 32.92 | 33.54 |
| HORVU5Hr1G104360.1 | Barley | nucleus | 32.92 | 32.12 |
| HORVU5Hr1G103940.1 | Barley | nucleus | 39.75 | 31.07 |
| HORVU2Hr1G022940.2 | Barley | cytosol, peroxisome | 32.3 | 30.41 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | EMBL:AK359310 | InterPro:AN1-like_Znf | UniProt:F2D600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:HORVU7Hr1G050270 |
| EnsemblPlants:HORVU7Hr1G050270.1 | InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 | PFAM:PF01754 |
| PFscan:PS51036 | PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF64 | SMART:SM00154 | SMART:SM00259 |
| SUPFAM:SSF118310 | SUPFAM:SSF57716 | UniParc:UPI0002005CCD | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D600]
Coordinates
chrchr7H:+:180472600..180476521
Molecular Weight (calculated)
17480.7 Da
IEP (calculated)
9.047
GRAVY (calculated)
-0.490
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQRDKKVEE PTEVHLHAAE ITLCANSCGF PGNPATKNLC QNCFLASSSS PPSPSSSPPA FPLFDKPRPA AAASPALQAP PVYMAVDRPA DPKASKSSVN
101: RCHNCRKRVG LTGFRCRCGE MFCGAHRYSD RHDCSYDYKS AARDAIAREN PVVRAAKIVR F
101: RCHNCRKRVG LTGFRCRCGE MFCGAHRYSD RHDCSYDYKS AARDAIAREN PVVRAAKIVR F
001: MAQRTEKEET EFKVLETLTT TTTTLCTNNC GVTANPATNN MCQKCFNASL VSAAAGVVES GSILKRSARS VNLRSSPAKV VIRPREIDAV KKRDQQIVNR
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
101: CSGCRKKVGL TGFRCRCGEL FCSEHRYSDR HDCSYDYKTA GREAIARENP VVKAAKMVKV
Arabidopsis Description
SAP5Zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.