Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G436300.1 | Wheat | plastid | 85.91 | 84.21 |
| TraesCS5B01G430200.1 | Wheat | nucleus | 85.23 | 84.11 |
| TraesCS5A01G428300.1 | Wheat | nucleus | 83.22 | 81.58 |
| HORVU5Hr1G104360.1 | Barley | nucleus | 71.14 | 64.24 |
| HORVU5Hr1G103940.1 | Barley | nucleus | 69.13 | 50.0 |
| OQU90855 | Sorghum | nucleus | 52.35 | 43.33 |
| Os03t0793000-01 | Rice | nucleus | 47.65 | 42.01 |
| AT4G14225.1 | Thale cress | cytosol, mitochondrion, plastid | 34.23 | 40.8 |
| HORVU3Hr1G067990.1 | Barley | cytosol, nucleus, plastid | 36.91 | 40.74 |
| HORVU2Hr1G036250.1 | Barley | nucleus | 41.61 | 39.24 |
| HORVU5Hr1G104240.1 | Barley | nucleus, peroxisome, plastid | 42.28 | 39.13 |
| PGSC0003DMT400088043 | Potato | cytosol | 34.9 | 38.52 |
| CDY49709 | Canola | cytosol | 33.56 | 38.17 |
| Bra019169.1-P | Field mustard | cytosol | 33.56 | 38.17 |
| PGSC0003DMT400086587 | Potato | nucleus | 31.54 | 37.9 |
| CDX90265 | Canola | cytosol | 32.21 | 36.92 |
| Bra010753.1-P | Field mustard | cytosol | 32.21 | 36.92 |
| CDY65025 | Canola | cytosol | 32.21 | 36.92 |
| CDY57287 | Canola | cytosol | 33.56 | 36.76 |
| Solyc07g055090.1.1 | Tomato | cytosol, nucleus, peroxisome | 32.21 | 36.36 |
| PGSC0003DMT400097759 | Potato | cytosol | 32.21 | 35.56 |
| GSMUA_Achr9P17970_001 | Banana | cytosol, mitochondrion, nucleus | 33.56 | 35.46 |
| GSMUA_Achr9P07600_001 | Banana | nucleus | 33.56 | 35.46 |
| HORVU7Hr1G050270.1 | Barley | nucleus | 38.26 | 35.4 |
| AT4G25380.1 | Thale cress | nucleus | 30.87 | 35.38 |
| HORVU2Hr1G022940.2 | Barley | cytosol, peroxisome | 40.27 | 35.09 |
| CDX92701 | Canola | cytosol | 31.54 | 34.81 |
| Zm00001d034389_P001 | Maize | peroxisome | 37.58 | 34.78 |
| KRH09258 | Soybean | cytosol, extracellular, nucleus, plastid | 32.89 | 34.51 |
| KRH38756 | Soybean | nucleus, plastid | 34.23 | 32.9 |
| VIT_16s0022g01980.t01 | Wine grape | nucleus | 30.87 | 30.26 |
| VIT_01s0011g02290.t01 | Wine grape | nucleus | 28.86 | 27.92 |
| HORVU1Hr1G032850.1 | Barley | nucleus | 28.19 | 27.27 |
| HORVU5Hr1G072920.1 | Barley | plastid | 34.9 | 20.88 |
| VIT_16s0022g01680.t01 | Wine grape | nucleus | 28.19 | 17.57 |
| Os03t0793300-01 | Rice | nucleus | 20.13 | 12.66 |
Protein Annotations
| MapMan:35.1 | Gene3D:4.10.1110.10 | UniProt:A0A287SJV6 | InterPro:AN1-like_Znf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0008270 | GO:GO:0046872 | EnsemblPlantsGene:HORVU5Hr1G103980 | EnsemblPlants:HORVU5Hr1G103980.1 |
| InterPro:IPR000058 | InterPro:IPR002653 | InterPro:IPR035896 | PFAM:PF01428 | PFAM:PF01754 | PFscan:PS51036 |
| PFscan:PS51039 | PANTHER:PTHR10634 | PANTHER:PTHR10634:SF40 | SMART:SM00154 | SMART:SM00259 | SUPFAM:SSF118310 |
| SUPFAM:SSF57716 | UniParc:UPI000B466EC4 | InterPro:Znf_A20 | InterPro:Znf_AN1 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr5H:+:617883103..617883552
Molecular Weight (calculated)
15701.8 Da
IEP (calculated)
9.088
GRAVY (calculated)
-0.171
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: HASAATATAQ KRRCTDGETA GMCAGGCGFF GAATTGNMCS KCYKDHILAA SAPPPEKKAK MTVSIAASRD VAAESFVASA KQSAVRASRC VACRKKVGLL
101: GFLCRCEGTF CSVHRYSDKH DCGFDYKTAG QEQIAKHNTV VVADKITRI
101: GFLCRCEGTF CSVHRYSDKH DCGFDYKTAG QEQIAKHNTV VVADKITRI
001: MAEEHRCETP EGHRLCVNNC GFFGSSATMN LCSNCYGDLC LKQQQQASMK STVESSLSPV IAPVLENYAA ELEIPTTKKT EEKKPIQIPT EQPSPPQRPN
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
101: RCTVCRKRVG LTGFMCRCGT TFCGSHRYPE VHGCTFDFKS AGREEIAKAN PLVIAAKLQK I
Arabidopsis Description
SAP4Zinc finger A20 and AN1 domain-containing stress-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJM6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.