Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G162100.1 | Wheat | cytosol | 87.09 | 86.31 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 86.49 | 85.71 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 86.79 | 85.63 |
| Os01t0218200-00 | Rice | plastid | 79.13 | 78.42 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 25.53 | 76.58 |
| EES02247 | Sorghum | plastid | 77.78 | 75.73 |
| Zm00001d008930_P003 | Maize | cytosol | 75.83 | 74.81 |
| Zm00001d039362_P002 | Maize | cytosol | 74.62 | 74.18 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 23.42 | 59.09 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 42.34 | 56.06 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 55.41 | 53.87 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 53.15 | 52.6 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 51.2 | 52.54 |
| KRH55099 | Soybean | nucleus | 52.55 | 51.62 |
| KRH22291 | Soybean | plastid | 44.89 | 51.2 |
| KRH26223 | Soybean | nucleus | 51.8 | 51.04 |
| PGSC0003DMT400054803 | Potato | cytosol | 22.52 | 51.02 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 52.55 | 50.87 |
| KRH21985 | Soybean | cytosol | 52.55 | 50.58 |
| KRH27330 | Soybean | cytosol | 52.4 | 50.0 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 53.0 | 49.58 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 51.35 | 49.35 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 52.55 | 49.3 |
| CDY02514 | Canola | cytosol, plastid | 49.25 | 48.96 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 49.25 | 48.96 |
| Bra038116.1-P | Field mustard | cytosol | 48.2 | 48.78 |
| CDY25865 | Canola | cytosol | 48.05 | 48.63 |
| CDY25722 | Canola | cytosol, plastid | 48.5 | 48.43 |
| CDY45930 | Canola | cytosol | 47.9 | 48.41 |
| Solyc07g062580.2.1 | Tomato | cytosol | 50.15 | 47.65 |
| PGSC0003DMT400032362 | Potato | cytosol | 49.85 | 47.43 |
| CDY34224 | Canola | cytosol | 4.8 | 46.38 |
| AT1G53300.1 | Thale cress | cytosol | 48.5 | 46.21 |
| CDY61202 | Canola | cytosol | 46.55 | 46.2 |
| Bra000267.1-P | Field mustard | cytosol | 46.55 | 46.13 |
| AT2G42580.1 | Thale cress | cytosol | 47.3 | 45.59 |
| CDY42827 | Canola | cytosol | 45.8 | 45.45 |
| AT3G58620.1 | Thale cress | cytosol | 46.55 | 45.45 |
| CDY51514 | Canola | cytosol | 45.65 | 45.44 |
| CDY55390 | Canola | cytosol | 45.5 | 45.29 |
| PGSC0003DMT400054902 | Potato | cytosol | 20.27 | 45.15 |
| KRH27037 | Soybean | nucleus | 45.35 | 44.74 |
| Bra007405.1-P | Field mustard | cytosol | 45.2 | 44.73 |
| Bra004709.1-P | Field mustard | cytosol | 43.99 | 44.6 |
| CDY49237 | Canola | cytosol | 44.29 | 44.23 |
| CDX71941 | Canola | cytosol | 44.74 | 44.21 |
| HORVU4Hr1G024490.1 | Barley | cytosol | 20.12 | 41.88 |
| Solyc10g007240.1.1 | Tomato | cytosol | 37.09 | 41.58 |
| PGSC0003DMT400054904 | Potato | cytosol | 37.09 | 40.89 |
| PGSC0003DMT400054909 | Potato | cytosol | 25.23 | 40.78 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 37.24 | 40.33 |
| PGSC0003DMT400054911 | Potato | cytosol | 31.23 | 39.92 |
| Bra023795.1-P | Field mustard | cytosol | 5.26 | 39.77 |
| AT3G14950.1 | Thale cress | cytosol | 42.94 | 39.18 |
| Solyc10g007230.1.1 | Tomato | cytosol | 34.68 | 38.76 |
| Solyc10g007420.2.1 | Tomato | cytosol | 24.62 | 38.59 |
| Solyc10g007250.1.1 | Tomato | cytosol | 16.07 | 38.35 |
| Bra027292.1-P | Field mustard | cytosol | 42.19 | 38.28 |
| CDY32327 | Canola | cytosol | 41.74 | 38.13 |
| CDX97619 | Canola | cytosol | 41.29 | 37.93 |
| CDY20095 | Canola | nucleus | 41.44 | 37.91 |
| CDX98517 | Canola | cytosol | 40.99 | 37.71 |
| Solyc10g007220.1.1 | Tomato | cytosol | 28.23 | 37.23 |
| Bra021583.1-P | Field mustard | nucleus | 41.74 | 36.77 |
| PGSC0003DMT400091014 | Potato | nucleus | 33.33 | 36.57 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 20.12 | 35.45 |
| CDY40820 | Canola | mitochondrion | 14.71 | 34.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.96 | 34.7 |
| CDY34222 | Canola | cytosol | 15.92 | 34.42 |
| Bra023793.1-P | Field mustard | cytosol | 18.92 | 30.58 |
| CDY34223 | Canola | cytosol | 14.56 | 29.75 |
| HORVU6Hr1G074660.5 | Barley | plastid | 27.03 | 28.85 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 14.11 | 28.83 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | UniProt:A0A287KJ70 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0045454 | EnsemblPlantsGene:HORVU3Hr1G027650 | EnsemblPlants:HORVU3Hr1G027650.2 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 |
| InterPro:IPR019734 | PFAM:PF00085 | PFAM:PF00515 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR22904 | PANTHER:PTHR22904:SF402 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000B462E34 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:119669999..119674104
Molecular Weight (calculated)
72627.7 Da
IEP (calculated)
9.234
GRAVY (calculated)
-0.386
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: LHRAAPLRPL CLLRSKSTLP SPPAALHSHP RPPALPLARS PSSFLACSLP SPRLPSPISR DPHPHPRLPL PRPRPPPHAA LASAPAPAPR SERQAGARRN
101: VQPPHTPSSS STSPLTNALP AGNICPTGRL AKPLPSFSAA STPPPPAPPR AIRHDVLGSG TGNYGHGSIM RSRSGGVAPE EDAAVRRAMS SADPEELKRA
201: GNEQYKKGYF EEALRLYDRA LALCPDNAAC RGNRAAALTG LRRFGDAIKE CEEAVRIDPS YGRAHQRLAS LHIRLGHLED AQKHLSLATP QPDLLELHKL
301: QTVEKHLGRC LDSRKVGDWK NVLRECDAAI AAGADSSALL FAARAEALLR LNQLDEADMA ISSASKLDYS SSCTSDTKFC GFFANAYLYY AHAQVDIALG
401: RFDHAVSSAD KARIIDPRND EVITMHNNVK AVARARSLGN ELFKSGKFSE ACIAYGEGLK HHPVNPVLHC NRAACRFKLG QWEKSIEDCN EALMIQPNYT
501: KALLRRAASY GKVERWAEAL KDYEVLRKEL PGDTEVAEAY FHAQVALKSS RGEEVSNLKF GGEVEAVTGM EQFQMATSLP GVSVVHFMTP SNQQCCKISP
601: FVNALCTKYP SVNFLKVDVN ESPAVARAEN VRTVPTFKIY KNAIRVKEMI CPSQQLLEYS VRHYGT
101: VQPPHTPSSS STSPLTNALP AGNICPTGRL AKPLPSFSAA STPPPPAPPR AIRHDVLGSG TGNYGHGSIM RSRSGGVAPE EDAAVRRAMS SADPEELKRA
201: GNEQYKKGYF EEALRLYDRA LALCPDNAAC RGNRAAALTG LRRFGDAIKE CEEAVRIDPS YGRAHQRLAS LHIRLGHLED AQKHLSLATP QPDLLELHKL
301: QTVEKHLGRC LDSRKVGDWK NVLRECDAAI AAGADSSALL FAARAEALLR LNQLDEADMA ISSASKLDYS SSCTSDTKFC GFFANAYLYY AHAQVDIALG
401: RFDHAVSSAD KARIIDPRND EVITMHNNVK AVARARSLGN ELFKSGKFSE ACIAYGEGLK HHPVNPVLHC NRAACRFKLG QWEKSIEDCN EALMIQPNYT
501: KALLRRAASY GKVERWAEAL KDYEVLRKEL PGDTEVAEAY FHAQVALKSS RGEEVSNLKF GGEVEAVTGM EQFQMATSLP GVSVVHFMTP SNQQCCKISP
601: FVNALCTKYP SVNFLKVDVN ESPAVARAEN VRTVPTFKIY KNAIRVKEMI CPSQQLLEYS VRHYGT
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.