Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G072660.2 | Barley | cytosol, plasma membrane, plastid | 76.26 | 100.0 |
| TraesCS2D01G291300.1 | Wheat | cytosol, plastid | 71.69 | 94.01 |
| TraesCS2B01G310000.1 | Wheat | cytosol | 71.69 | 94.01 |
| TraesCS2A01G293700.1 | Wheat | cytosol, golgi, plastid, unclear | 71.23 | 93.41 |
| KXG35044 | Sorghum | cytosol | 70.32 | 90.59 |
| Os08t0478200-01 | Rice | mitochondrion, plastid | 68.95 | 89.35 |
| GSMUA_Achr10P... | Banana | cytosol | 56.62 | 85.52 |
| GSMUA_Achr7P09760_001 | Banana | cytosol | 63.47 | 82.25 |
| Solyc11g072450.1.1 | Tomato | plastid | 63.01 | 82.14 |
| PGSC0003DMT400070407 | Potato | cytosol | 62.56 | 81.55 |
| VIT_13s0019g03860.t01 | Wine grape | cytosol | 61.64 | 80.36 |
| PGSC0003DMT400059780 | Potato | cytosol | 61.64 | 80.36 |
| CDX95329 | Canola | cytosol | 60.73 | 79.17 |
| KRG91849 | Soybean | endoplasmic reticulum | 60.73 | 79.17 |
| Bra006918.1-P | Field mustard | cytosol | 60.27 | 78.57 |
| CDY23204 | Canola | cytosol | 60.27 | 78.57 |
| CDX90607 | Canola | cytosol | 60.27 | 78.57 |
| CDX78082 | Canola | cytosol | 60.27 | 78.57 |
| CDX73643 | Canola | cytosol | 60.27 | 78.57 |
| Bra012809.1-P | Field mustard | cytosol | 60.27 | 78.57 |
| AT3G52300.1 | Thale cress | cytosol, mitochondrion | 60.27 | 78.57 |
| CDY29076 | Canola | cytosol | 59.82 | 77.98 |
| Bra033442.1-P | Field mustard | cytosol | 59.36 | 77.38 |
| Zm00001d031825_P001 | Maize | cytosol | 62.56 | 76.97 |
| KRH34917 | Soybean | endoplasmic reticulum, mitochondrion | 58.9 | 76.79 |
| Solyc06g005010.1.1 | Tomato | plastid | 23.29 | 59.3 |
| Solyc06g005020.1.1 | Tomato | plastid | 35.16 | 53.85 |
Protein Annotations
| Gene3D:1.20.58.880 | MapMan:2.4.6.1.4 | UniProt:A0A287IF50 | InterPro:ATP_synth_F0_dsu_mt | InterPro:ATP_synth_F0_dsu_sf_mt | ncoils:Coil |
| GO:GO:0000276 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015078 | GO:GO:0015986 | GO:GO:0016020 | EnsemblPlantsGene:HORVU2Hr1G072650 |
| EnsemblPlants:HORVU2Hr1G072650.1 | InterPro:IPR036228 | PFAM:PD968187 | PFAM:PF05873 | PIRSF:PIRSF005514 | PANTHER:PTHR12700 |
| SUPFAM:SSF161065 | UniParc:UPI000B486974 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:521292906..521295057
Molecular Weight (calculated)
25057.9 Da
IEP (calculated)
5.867
GRAVY (calculated)
-0.731
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: GAGKALVILA PHKLGTWEEI TGTYNSGPIS TPETIKIYTD TGLARLADPE PKMSGVKKVA DVAAKAGKAI DWDGMAKMLV SEEARKEFAN LRRTFEDVNH
101: QLQTKFSQEP QPIDWEYYRK GIGSKVVDMY KEAYDSIEIP KYVDTVTPQY KPKFDALLVE LKEAEKTSLK ESERIEKEIA EMKEMKKKIS TMTADEYFAK
201: HPELKKKFDD EMRNDYWGY
101: QLQTKFSQEP QPIDWEYYRK GIGSKVVDMY KEAYDSIEIP KYVDTVTPQY KPKFDALLVE LKEAEKTSLK ESERIEKEIA EMKEMKKKIS TMTADEYFAK
201: HPELKKKFDD EMRNDYWGY
001: MSGAGKKIAD VAFKASRTID WDGMAKVLVT DEARREFSNL RRAFDEVNTQ LQTKFSQEPE PIDWDYYRKG IGAGIVDKYK EAYDSIEIPK YVDKVTPEYK
101: PKFDALLVEL KEAEQKSLKE SERLEKEIAD VQEISKKLST MTADEYFEKH PELKKKFDDE IRNDNWGY
101: PKFDALLVEL KEAEQKSLKE SERLEKEIAD VQEISKKLST MTADEYFEKH PELKKKFDDE IRNDNWGY
Arabidopsis Description
ATPQATP synthase subunit d, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FT52]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.