Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P09760_001 | Banana | cytosol | 91.72 | 78.7 |
| Solyc11g072450.1.1 | Tomato | plastid | 88.28 | 76.19 |
| PGSC0003DMT400070407 | Potato | cytosol | 88.28 | 76.19 |
| KRG91849 | Soybean | endoplasmic reticulum | 88.28 | 76.19 |
| VIT_13s0019g03860.t01 | Wine grape | cytosol | 87.59 | 75.6 |
| EES15140 | Sorghum | cytosol | 87.59 | 75.15 |
| PGSC0003DMT400059780 | Potato | cytosol | 86.21 | 74.4 |
| HORVU2Hr1G072660.2 | Barley | cytosol, plasma membrane, plastid | 85.52 | 74.25 |
| Os08t0478200-01 | Rice | mitochondrion, plastid | 86.21 | 73.96 |
| AT3G52300.1 | Thale cress | cytosol, mitochondrion | 85.52 | 73.81 |
| KRH34917 | Soybean | endoplasmic reticulum, mitochondrion | 85.52 | 73.81 |
| TraesCS2D01G291300.1 | Wheat | cytosol, plastid | 84.83 | 73.65 |
| TraesCS2B01G310000.1 | Wheat | cytosol | 84.83 | 73.65 |
| TraesCS2A01G293700.1 | Wheat | cytosol, golgi, plastid, unclear | 84.14 | 73.05 |
| KXG35044 | Sorghum | cytosol | 85.52 | 72.94 |
| Bra006918.1-P | Field mustard | cytosol | 84.14 | 72.62 |
| CDY23204 | Canola | cytosol | 84.14 | 72.62 |
| CDX95329 | Canola | cytosol | 84.14 | 72.62 |
| CDX90607 | Canola | cytosol | 84.14 | 72.62 |
| CDX78082 | Canola | cytosol | 84.14 | 72.62 |
| CDX73643 | Canola | cytosol | 84.14 | 72.62 |
| Bra012809.1-P | Field mustard | cytosol | 84.14 | 72.62 |
| CDY29076 | Canola | cytosol | 83.45 | 72.02 |
| Bra033442.1-P | Field mustard | cytosol | 82.76 | 71.43 |
| Zm00001d031825_P001 | Maize | cytosol | 80.69 | 65.73 |
| HORVU2Hr1G072650.1 | Barley | cytosol | 85.52 | 56.62 |
| Solyc06g005020.1.1 | Tomato | plastid | 51.72 | 52.45 |
| Solyc06g005010.1.1 | Tomato | plastid | 25.52 | 43.02 |
Protein Annotations
| Gene3D:1.20.58.880 | MapMan:2.4.6.1.4 | InterPro:ATP_synth_F0_dsu_mt | InterPro:ATP_synth_F0_dsu_sf_mt | ncoils:Coil | GO:GO:0000276 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005743 | GO:GO:0006139 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015078 | GO:GO:0015986 | GO:GO:0015992 |
| GO:GO:0016020 | EnsemblPlantsGene:GSMUA_Achr10G27350_001 | EnsemblPlants:GSMUA_Achr10P27350_001 | EnsemblPlants:GSMUA_Achr10T27350_001 | InterPro:IPR036228 | UniProt:M0RLV9 |
| PFAM:PD968187 | PFAM:PF05873 | PIRSF:PIRSF005514 | PANTHER:PTHR12700 | SUPFAM:SSF161065 | UniParc:UPI0002967A63 |
Description
ATP synthase subunit d, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G27350_001]
Coordinates
chr10:-:30544791..30550638
Molecular Weight (calculated)
17200.2 Da
IEP (calculated)
4.602
GRAVY (calculated)
-0.974
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKALVSDEA RKEFANLRRA FDEVNSQLQT KFSQEPEPID WEYYRKGIGS RLVDMYKEAY ESIEIPKYVD TVTPEYKPKF DALLVELKEA EKQSLKESAR
101: LEKEIAEVQE MKKKISTMTA DEYFENHPEL KQKFDDEIRN DNWGY
101: LEKEIAEVQE MKKKISTMTA DEYFENHPEL KQKFDDEIRN DNWGY
001: MSGAGKKIAD VAFKASRTID WDGMAKVLVT DEARREFSNL RRAFDEVNTQ LQTKFSQEPE PIDWDYYRKG IGAGIVDKYK EAYDSIEIPK YVDKVTPEYK
101: PKFDALLVEL KEAEQKSLKE SERLEKEIAD VQEISKKLST MTADEYFEKH PELKKKFDDE IRNDNWGY
101: PKFDALLVEL KEAEQKSLKE SERLEKEIAD VQEISKKLST MTADEYFEKH PELKKKFDDE IRNDNWGY
Arabidopsis Description
ATPQATP synthase subunit d, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FT52]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.