Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
14690504
|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95329 | Canola | cytosol | 95.24 | 95.24 |
| Bra012809.1-P | Field mustard | cytosol | 94.64 | 94.64 |
| Bra033442.1-P | Field mustard | cytosol | 94.64 | 94.64 |
| CDX90607 | Canola | cytosol | 94.64 | 94.64 |
| CDY23204 | Canola | cytosol | 94.64 | 94.64 |
| CDX73643 | Canola | cytosol | 94.05 | 94.05 |
| CDX78082 | Canola | cytosol | 94.05 | 94.05 |
| CDY29076 | Canola | cytosol | 94.05 | 94.05 |
| Bra006918.1-P | Field mustard | cytosol | 94.05 | 94.05 |
| PGSC0003DMT400059780 | Potato | cytosol | 85.71 | 85.71 |
| GSMUA_Achr10P... | Banana | cytosol | 73.81 | 85.52 |
| KRG91849 | Soybean | endoplasmic reticulum | 85.12 | 85.12 |
| Solyc11g072450.1.1 | Tomato | plastid | 83.33 | 83.33 |
| VIT_13s0019g03860.t01 | Wine grape | cytosol | 83.33 | 83.33 |
| KRH34917 | Soybean | endoplasmic reticulum, mitochondrion | 82.74 | 82.74 |
| PGSC0003DMT400070407 | Potato | cytosol | 82.74 | 82.74 |
| GSMUA_Achr7P09760_001 | Banana | cytosol | 79.76 | 79.29 |
| HORVU2Hr1G072660.2 | Barley | cytosol, plasma membrane, plastid | 78.57 | 79.04 |
| EES15140 | Sorghum | cytosol | 79.17 | 78.7 |
| TraesCS2A01G293700.1 | Wheat | cytosol, golgi, plastid, unclear | 77.38 | 77.84 |
| TraesCS2B01G310000.1 | Wheat | cytosol | 77.38 | 77.84 |
| TraesCS2D01G291300.1 | Wheat | cytosol, plastid | 77.38 | 77.84 |
| Os08t0478200-01 | Rice | mitochondrion, plastid | 76.79 | 76.33 |
| KXG35044 | Sorghum | cytosol | 75.6 | 74.71 |
| Zm00001d031825_P001 | Maize | cytosol | 75.6 | 71.35 |
| Solyc06g005010.1.1 | Tomato | plastid | 30.95 | 60.47 |
| HORVU2Hr1G072650.1 | Barley | cytosol | 78.57 | 60.27 |
| Solyc06g005020.1.1 | Tomato | plastid | 50.0 | 58.74 |
Protein Annotations
| Gene3D:1.20.58.880 | MapMan:2.4.6.1.4 | EntrezGene:824395 | UniProt:A0A178V5U2 | ProteinID:AEE78928.1 | EMBL:AJ271469 |
| ArrayExpress:AT3G52300 | EnsemblPlantsGene:AT3G52300 | RefSeq:AT3G52300 | TAIR:AT3G52300 | RefSeq:AT3G52300-TAIR-G | EnsemblPlants:AT3G52300.1 |
| TAIR:AT3G52300.1 | Symbol:ATPQ | InterPro:ATP_synth_F0_dsu_mt | InterPro:ATP_synth_F0_dsu_sf_mt | EMBL:AY050330 | EMBL:AY086788 |
| EMBL:AY094036 | Unigene:At.23940 | ProteinID:CAC07921.1 | ncoils:Coil | GO:GO:0000274 | GO:GO:0000276 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0003824 | GO:GO:0005198 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005507 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005753 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009535 |
| GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | GO:GO:0015078 |
| GO:GO:0015986 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0022626 | GO:GO:0042788 |
| GO:GO:0045263 | GO:GO:0046933 | GO:GO:0099132 | InterPro:IPR036228 | RefSeq:NP_190798.1 | ProteinID:OAP01567.1 |
| PFAM:PD968187 | PFAM:PF05873 | PIRSF:PIRSF005514 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12700 |
| UniProt:Q9FT52 | SUPFAM:SSF161065 | UniParc:UPI0000163705 | SEG:seg | : | : |
Description
ATPQATP synthase subunit d, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FT52]
Coordinates
chr3:+:19396424..19398444
Molecular Weight (calculated)
19587.0 Da
IEP (calculated)
4.815
GRAVY (calculated)
-0.896
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAGKKIAD VAFKASRTID WDGMAKVLVT DEARREFSNL RRAFDEVNTQ LQTKFSQEPE PIDWDYYRKG IGAGIVDKYK EAYDSIEIPK YVDKVTPEYK
101: PKFDALLVEL KEAEQKSLKE SERLEKEIAD VQEISKKLST MTADEYFEKH PELKKKFDDE IRNDNWGY
101: PKFDALLVEL KEAEQKSLKE SERLEKEIAD VQEISKKLST MTADEYFEKH PELKKKFDDE IRNDNWGY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.