Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P08560_001 | Banana | cytosol | 77.24 | 30.22 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 68.66 | 28.35 |
| Os05t0587300-01 | Rice | cytosol | 51.87 | 25.05 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 56.72 | 21.35 |
| GSMUA_Achr10P... | Banana | cytosol | 52.61 | 21.14 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 51.12 | 20.36 |
| EES01073 | Sorghum | cytosol | 50.75 | 19.97 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 51.87 | 19.94 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 51.87 | 19.91 |
| KRH21985 | Soybean | cytosol | 51.12 | 19.8 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 51.12 | 19.74 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 50.37 | 19.62 |
| KRH27330 | Soybean | cytosol | 50.75 | 19.48 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 50.0 | 19.48 |
| Zm00001d044479_P001 | Maize | cytosol | 49.25 | 19.38 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 49.63 | 19.33 |
| OQU78515 | Sorghum | cytosol | 50.37 | 19.29 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 49.63 | 19.19 |
| Zm00001d011352_P001 | Maize | cytosol | 48.13 | 18.94 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 48.51 | 18.9 |
| Bra038116.1-P | Field mustard | cytosol | 45.15 | 18.39 |
| CDY25865 | Canola | cytosol | 45.15 | 18.39 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 45.9 | 18.22 |
| CDY45930 | Canola | cytosol | 44.78 | 18.21 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 45.52 | 18.15 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 45.52 | 18.15 |
| Solyc07g062580.2.1 | Tomato | cytosol | 47.39 | 18.12 |
| Os01t0218200-00 | Rice | plastid | 44.78 | 17.86 |
| PGSC0003DMT400032362 | Potato | cytosol | 46.64 | 17.86 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 44.4 | 17.76 |
| CDY02514 | Canola | cytosol, plastid | 44.4 | 17.76 |
| KRH26223 | Soybean | nucleus | 44.78 | 17.75 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 47.01 | 17.75 |
| CDY25722 | Canola | cytosol, plastid | 44.03 | 17.69 |
| Bra004709.1-P | Field mustard | cytosol | 43.28 | 17.66 |
| Zm00001d039362_P002 | Maize | cytosol | 44.03 | 17.61 |
| KRH55099 | Soybean | nucleus | 44.4 | 17.55 |
| Zm00001d008930_P003 | Maize | cytosol | 44.03 | 17.48 |
| EES02247 | Sorghum | plastid | 44.4 | 17.4 |
| CDY55390 | Canola | cytosol | 43.28 | 17.34 |
| CDY51514 | Canola | cytosol | 43.28 | 17.34 |
| CDY61202 | Canola | cytosol | 42.54 | 16.99 |
| CDY42827 | Canola | cytosol | 42.54 | 16.99 |
| Bra000267.1-P | Field mustard | cytosol | 42.54 | 16.96 |
| AT2G42580.1 | Thale cress | cytosol | 43.66 | 16.93 |
| CDY49237 | Canola | cytosol | 41.79 | 16.79 |
| AT3G58620.1 | Thale cress | cytosol | 42.54 | 16.72 |
| Bra007405.1-P | Field mustard | cytosol | 41.42 | 16.49 |
| CDX71941 | Canola | cytosol | 41.42 | 16.47 |
| AT1G53300.1 | Thale cress | cytosol | 42.91 | 16.45 |
| KRH22291 | Soybean | plastid | 31.72 | 14.55 |
| AT3G14950.1 | Thale cress | cytosol | 38.81 | 14.25 |
| PGSC0003DMT400054904 | Potato | cytosol | 31.72 | 14.07 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 34.7 | 13.96 |
| Solyc10g007240.1.1 | Tomato | cytosol | 30.6 | 13.8 |
| CDY34223 | Canola | cytosol | 16.79 | 13.8 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 16.79 | 13.8 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 31.34 | 13.66 |
| Bra023793.1-P | Field mustard | cytosol | 20.9 | 13.59 |
| Solyc10g007230.1.1 | Tomato | cytosol | 30.22 | 13.59 |
| CDY20095 | Canola | nucleus | 36.19 | 13.32 |
| CDY32327 | Canola | cytosol | 35.82 | 13.17 |
| KRH27037 | Soybean | nucleus | 32.84 | 13.04 |
| CDX97619 | Canola | cytosol | 35.07 | 12.97 |
| Bra021583.1-P | Field mustard | nucleus | 36.57 | 12.96 |
| Bra027292.1-P | Field mustard | cytosol | 35.45 | 12.94 |
| CDX98517 | Canola | cytosol | 34.7 | 12.85 |
| GSMUA_Achr11P... | Banana | plastid | 26.12 | 11.97 |
| PGSC0003DMT400054909 | Potato | cytosol | 18.28 | 11.89 |
| Zm00001d009724_P009 | Maize | cytosol | 45.52 | 11.41 |
| PGSC0003DMT400054911 | Potato | cytosol | 22.01 | 11.32 |
| CDY40820 | Canola | mitochondrion | 11.19 | 10.68 |
| Os05t0210600-01 | Rice | cytosol | 15.3 | 10.22 |
| PGSC0003DMT400091014 | Potato | nucleus | 22.39 | 9.88 |
| CDY34222 | Canola | cytosol | 11.19 | 9.74 |
| GSMUA_Achr3P24690_001 | Banana | cytosol | 24.25 | 9.57 |
| Solyc10g007220.1.1 | Tomato | cytosol | 16.04 | 8.51 |
| PGSC0003DMT400054803 | Potato | cytosol | 8.58 | 7.82 |
| Solyc10g007250.1.1 | Tomato | cytosol | 7.84 | 7.53 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 7.09 | 3.78 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 5.22 | 3.7 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 2.99 | 3.6 |
| GSMUA_Achr2P02050_001 | Banana | cytosol | 1.49 | 1.75 |
| CDY34224 | Canola | cytosol | 0.37 | 1.45 |
| Solyc10g007420.2.1 | Tomato | cytosol | 1.87 | 1.18 |
| Bra023795.1-P | Field mustard | cytosol | 0.37 | 1.14 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 0.75 | 0.76 |
| PGSC0003DMT400054902 | Potato | cytosol | 0.0 | 0.0 |
| Zm00001d006366_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d033961_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_AchrUn_randomG11170_001 |
| EnsemblPlants:GSMUA_AchrUn_randomP11170_001 | EnsemblPlants:GSMUA_AchrUn_randomT11170_001 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | UniProt:M0U876 |
| PFAM:PF14559 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF395 | SMART:SM00028 |
| SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0002959D2A | SEG:seg |
Description
Putative TPR repeat-containing thioredoxin TTL1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG11170_001]
Coordinates
chrchrUn_random:-:54068705..54069634
Molecular Weight (calculated)
27524.4 Da
IEP (calculated)
8.908
GRAVY (calculated)
-0.469
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRAGETGRP DHRIGSDSGA PGRLDPVADR FKTVLALEEN KPDFPDLGSP VSPLGQHAST QTSSCSSSSG SAGKAVPTAA IVARKPGAGA PDAGRLCHSG
101: ELFVESSPTA ADGRDLKTAT HRRSGSGPLI FSGGSGGGGS SSTASSPVIN ALPTGNICPS GKIGKTGMMH RTSPRSDVLG MATGRMDPLE ATRAGNEHYK
201: KGQYGEALAF YDKAVAMCPE NAACRGNRAA ALMGLGRLEE AARECEEAVR LDPTNGRAHQ RLACLKLR
101: ELFVESSPTA ADGRDLKTAT HRRSGSGPLI FSGGSGGGGS SSTASSPVIN ALPTGNICPS GKIGKTGMMH RTSPRSDVLG MATGRMDPLE ATRAGNEHYK
201: KGQYGEALAF YDKAVAMCPE NAACRGNRAA ALMGLGRLEE AARECEEAVR LDPTNGRAHQ RLACLKLR
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.