Factsheet for AT3G58620.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007405.1-P	Field mustard	cytosol	83.58	84.7
CDX71941	Canola	cytosol	83.28	84.27
CDY49237	Canola	cytosol	81.82	83.66
AT2G42580.1	Thale cress	cytosol	75.22	74.24
VIT_18s0001g09830.t01	Wine grape	cytosol	23.31	60.23
VIT_12s0028g02240.t01	Wine grape	cytosol	59.68	57.32
KRH22291	Soybean	plastid	48.39	56.51
GSMUA_Achr10P...	Banana	cytosol	51.76	52.92
Os01t0218200-00	Rice	plastid	49.85	50.6
Zm00001d039362_P002	Maize	cytosol	49.27	50.15
EES02247	Sorghum	plastid	50.0	49.85
GSMUA_Achr7P24480_001	Banana	cytosol	47.36	49.77
TraesCS3B01G162100.1	Wheat	cytosol	48.97	49.7
Zm00001d008930_P003	Maize	cytosol	48.83	49.33
GSMUA_Achr4P08560_001	Banana	cytosol	49.41	49.2
TraesCS3D01G144600.1	Wheat	cytosol	48.68	49.19
KRH27037	Soybean	nucleus	48.24	48.74
TraesCS3A01G143000.1	Wheat	cytosol	47.95	48.66
Zm00001d004494_P001	Maize	cytosol, mitochondrion	15.84	48.65
AT1G53300.1	Thale cress	cytosol	49.41	48.21
EES01073	Sorghum	cytosol	48.09	48.16
HORVU1Hr1G093390.2	Barley	cytosol	47.36	47.99
Zm00001d044479_P001	Maize	cytosol	47.36	47.43
GSMUA_Achr3P25160_001	Banana	cytosol	49.27	47.19
Os05t0210600-01	Rice	cytosol	27.71	47.13
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	34.75	47.12
TraesCS1A01G427400.1	Wheat	cytosol	48.09	47.06
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	47.36	46.95
OQU78515	Sorghum	cytosol	48.09	46.86
TraesCS1B01G462300.1	Wheat	cytosol	47.65	46.83
TraesCS3A01G221800.1	Wheat	cytosol	47.21	46.8
TraesCS1D01G437100.1	Wheat	nucleus	47.8	46.7
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	47.07	46.66
HORVU3Hr1G027650.2	Barley	mitochondrion	45.45	46.55
Zm00001d011352_P001	Maize	cytosol	46.33	46.4
Os05t0587300-01	Rice	cytosol	37.39	45.95
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	46.04	45.64
GSMUA_AchrUn_...	Banana	cytosol	16.72	42.54
AT3G14950.1	Thale cress	cytosol	43.11	40.27
AT1G78120.1	Thale cress	cytosol	25.66	33.02
AT5G10090.1	Thale cress	cytosol	27.86	31.99
AT5G65160.1	Thale cress	cytosol	27.27	31.37
Zm00001d009724_P009	Maize	cytosol	44.72	28.53
AT4G30480.2	Thale cress	cytosol	8.94	22.02
Zm00001d006366_P001	Maize	cytosol	0.29	0.86
Zm00001d033961_P001	Maize	cytosol	0.29	0.86

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.5	Gene3D:3.40.30.10	EntrezGene:825031	UniProt:A0A178VKQ3	ProteinID:AEE79807.1
ArrayExpress:AT3G58620	EnsemblPlantsGene:AT3G58620	RefSeq:AT3G58620	TAIR:AT3G58620	RefSeq:AT3G58620-TAIR-G	EnsemblPlants:AT3G58620.1
TAIR:AT3G58620.1	EMBL:BT003919	EMBL:BT005006	ProteinID:CAB68200.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0006950	GO:GO:0006970	GO:GO:0008150
GO:GO:0009628	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR013766	InterPro:IPR019734	RefSeq:NP_191421.2	ProteinID:OAP05845.1	PFAM:PF00085	PFAM:PF00515
PFAM:PF13174	PFAM:PF13414	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF374
UniProt:Q84JR9	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF52833	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_1	InterPro:TPR_repeat	Symbol:TTL4	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000000C1E1
SEG:seg	:	:	:	:	:

Description

TTL4TTL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ3]

Coordinates

chr3:+:21680027..21683280

Molecular Weight (calculated)

74390.9 Da

IEP (calculated)

9.181

GRAVY (calculated)

-0.431

Length

682 amino acids

Sequence
(BLAST)

001: MSHYRRHSLE PSITSKFRDS LSFQRDDDVI NKPDFRELDF GSPLRPRGSS SAAATPAASG SSSSSSGSAS GKPAVTSQFA RRSHSGELSG LSQTSPVKPG
101: SVNRNLKPGH RRSASAGTPL IYSGLGFSPV NNNNNSSRGG GSGATSPNPG VLPTGNICPS GRILKTGMAT RASVRPETLC TGTANYGHGN IIRTGGKVSH
201: ATKAAAEMSD SEEVKKAGNV MYRKGNYAEA LALYDRAISL SPENPAYRSN RAAALAASGR LEEAVKECLE AVRCDPSYAR AHQRLASLYL RLGEAENARR
301: HLCVSGQCPD QADLQRLQTL EKHLRLCTEA RKIGDWRTVI SEIDAAIANG ADSSPQLVAC KAEAFLRLHQ IKDSDLCISS IPRLDHHHTQ PPEKLFGIVC
401: DAYVLCVQAQ VDMALGRFEN AIVKVERAMT IDHSNSPEVV SVLNNVKNVA KARTRGNELF SSGRYSEASV AYGDGLKLDA FNSVLYCNRA ACWFKLGMWE
501: KSVDDCNQAL RIQPSYTKAL LRRAASYGKL GRWEDAVRDY EVLRKELPGD SEVAESLQRA RNALSNKSEE PKYLGFNNEV EEVSTLDKFK TATSLPGISV
601: FHFKSSSNRQ SEAISPFVNT LCLRYPLVHF FKVDVEESLA LAKAESIKKI PTFKIYKKGE KVKEMVCPSH QLLEDSVTHF LL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.