Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08814 | Canola | cytosol, plastid | 62.9 | 88.81 |
| Bra024360.1-P | Field mustard | mitochondrion | 87.52 | 88.57 |
| CDY68462 | Canola | cytosol | 87.52 | 88.12 |
| AT5G10090.1 | Thale cress | cytosol | 72.34 | 72.22 |
| KRH59356 | Soybean | plastid | 41.65 | 57.58 |
| KRG97591 | Soybean | plastid | 50.08 | 54.2 |
| KRH31282 | Soybean | plastid | 52.95 | 53.95 |
| KRH43206 | Soybean | cytosol, plastid | 49.75 | 53.83 |
| Solyc04g055000.2.1 | Tomato | cytosol | 50.08 | 50.6 |
| PGSC0003DMT400053133 | Potato | cytosol, plastid | 50.59 | 50.08 |
| Os02t0753500-01 | Rice | cytosol | 24.11 | 48.97 |
| VIT_00s0304g00060.t01 | Wine grape | plastid | 55.99 | 46.56 |
| HORVU4Hr1G024490.1 | Barley | cytosol | 24.11 | 44.69 |
| GSMUA_Achr11P... | Banana | plastid | 42.66 | 43.25 |
| KXG30730 | Sorghum | cytosol, plastid | 42.5 | 42.71 |
| Zm00001d052221_P002 | Maize | cytosol, nucleus, plastid | 41.82 | 42.39 |
| TraesCS6B01G330500.1 | Wheat | mitochondrion, plastid | 40.81 | 42.23 |
| Zm00001d018088_P001 | Maize | cytosol | 41.65 | 41.86 |
| TraesCS6A01G301400.1 | Wheat | mitochondrion | 39.29 | 39.23 |
| HORVU6Hr1G074660.5 | Barley | plastid | 40.3 | 38.3 |
| GSMUA_Achr3P24690_001 | Banana | cytosol | 42.83 | 37.41 |
| AT1G78120.1 | Thale cress | cytosol | 33.22 | 37.17 |
| AT2G42580.1 | Thale cress | cytosol | 33.39 | 28.65 |
| AT3G58620.1 | Thale cress | cytosol | 31.37 | 27.27 |
| AT1G53300.1 | Thale cress | cytosol | 30.86 | 26.18 |
| AT3G14950.1 | Thale cress | cytosol | 29.68 | 24.11 |
| AT4G30480.2 | Thale cress | cytosol | 8.6 | 18.41 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | EntrezGene:836639 | ProteinID:AED98010.1 | ArrayExpress:AT5G65160 | EnsemblPlantsGene:AT5G65160 |
| RefSeq:AT5G65160 | TAIR:AT5G65160 | RefSeq:AT5G65160-TAIR-G | EnsemblPlants:AT5G65160.1 | TAIR:AT5G65160.1 | Unigene:At.28917 |
| ProteinID:BAB11651.1 | EMBL:BT015361 | EMBL:BT015891 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | RefSeq:NP_201320.1 | PFAM:PF07719 | PO:PO:0000256 |
| PO:PO:0000262 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009029 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF360 | UniProt:Q9FJQ0 | SMART:SM00028 | SUPFAM:SSF48452 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | Symbol:TPR14 | InterPro:TPR_2 | InterPro:TPR_repeat | UniParc:UPI00000AA8FD |
| SEG:seg | : | : | : | : | : |
Description
TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
Coordinates
chr5:-:26031184..26034030
Molecular Weight (calculated)
65020.1 Da
IEP (calculated)
9.272
GRAVY (calculated)
-0.705
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.