Factsheet for HORVU6Hr1G074660.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	86.38	94.07
TraesCS6A01G301400.1	Wheat	mitochondrion	80.61	84.68
Os02t0753500-01	Rice	cytosol	38.3	81.85
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	67.63	72.14
KXG30730	Sorghum	cytosol, plastid	67.95	71.86
Zm00001d018088_P001	Maize	cytosol	64.74	68.47
HORVU4Hr1G024490.1	Barley	cytosol	25.96	50.62
CDY08814	Canola	cytosol, plastid	33.49	49.76
GSMUA_Achr11P...	Banana	plastid	43.75	46.67
Bra006046.1-P	Field mustard	cytosol	33.33	46.64
CDX78366	Canola	cytosol	33.33	46.64
CDX81156	Canola	cytosol	33.01	46.19
KRH15375	Soybean	cytosol	17.47	43.6
KRH59356	Soybean	plastid	29.33	42.66
KRH08675	Soybean	cytosol, mitochondrion, plastid	22.6	41.96
KRH31282	Soybean	plastid	38.62	41.41
Bra024360.1-P	Field mustard	mitochondrion	38.62	41.13
KRH43206	Soybean	cytosol, plastid	36.06	41.06
KRG97591	Soybean	plastid	35.9	40.88
CDY68462	Canola	cytosol	38.46	40.75
PGSC0003DMT400022057	Potato	plastid	28.53	40.73
Solyc04g055000.2.1	Tomato	cytosol	37.98	40.37
AT5G65160.1	Thale cress	cytosol	38.3	40.3
CDX85779	Canola	cytosol	36.7	39.83
CDY40077	Canola	cytosol	36.54	39.65
PGSC0003DMT400053133	Potato	cytosol, plastid	37.98	39.57
AT5G10090.1	Thale cress	cytosol	37.66	39.56
Bra009058.1-P	Field mustard	cytosol, mitochondrion	34.46	38.39
CDX69861	Canola	cytosol, mitochondrion	34.46	38.39
CDY21634	Canola	cytosol, mitochondrion	34.13	38.04
AT1G78120.1	Thale cress	cytosol	31.73	37.36
VIT_00s0304g00060.t01	Wine grape	plastid	42.47	37.17
CDX88420	Canola	cytosol	31.25	37.07
CDX87474	Canola	cytosol	30.93	36.69
Bra015628.1-P	Field mustard	cytosol	30.93	36.69
CDX68030	Canola	cytosol	29.49	36.15
Bra003657.1-P	Field mustard	cytosol	29.65	36.13
CDX79246	Canola	cytosol	29.33	35.74
Solyc04g073940.2.1	Tomato	cytosol	29.97	34.44
PGSC0003DMT400045666	Potato	cytosol	29.81	34.13
VIT_18s0001g05380.t01	Wine grape	plastid	36.7	32.39
KRH62368	Soybean	cytosol	33.81	32.26
KRH53085	Soybean	cytosol	33.65	30.09
KRH18895	Soybean	cytosol	32.69	29.02
KRH16702	Soybean	nucleus	31.57	28.39
HORVU1Hr1G093390.2	Barley	cytosol	29.81	27.64
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	29.97	27.18
HORVU3Hr1G027650.2	Barley	mitochondrion	28.85	27.03
Bra028602.1-P	Field mustard	cytosol	36.7	21.03

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A287UPR9	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU6Hr1G074660	EnsemblPlants:HORVU6Hr1G074660.5	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
PFAM:PF13176	PFAM:PF13414	PFAM:PF13432	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904
PANTHER:PTHR22904:SF360	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI000B470DD7	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:515259169..515263166

Molecular Weight (calculated)

67067.6 Da

IEP (calculated)

10.138

GRAVY (calculated)

-0.537

Length

624 amino acids

Sequence
(BLAST)

001: LPAPSSQPRR SLPTKTARRS QRPPSPPALP WLDPHPSSSP PRPNRRAVAN FAVAMTESRR APSGCAMFGI YSGMFRRRRS ASMSSLSRIN GSPQAAAADS
101: DAAPANPAQR KAGVHDDSAL VPRPKVMPLQ PQINGAAAQA AQRPSGDKSR PNRTMNGGAK AAAASPAVEY TGMAAELDKM IHDHQRVKGT TQMMRATSGN
201: MMMHRNLGNL NTGASARSSL DRSAKAAAAN DRAKAGPPGS NGYAFSGMGN IVSKPADQLC RALSHRTDPE KLKEMGNEEY REGHYAEAVA LYDQAIMMDP
301: TRPAYWSNKA AALAALGRLI DAVADCKEAV RIDPSYGRAH HRLGGLYLRL GEPDKAINYL KQSPVDSVSA DVSRAQSVKG RIAKCTDARK VRDWITVLQE
401: SQAAVSDGAD CAPQVMALQA EALLKLQRHD EADSALRGAL RFGVDESAKT FGTTAHAYVL MVRAQVDMAA GRLEEAVATA QTACELDPGS RETANVHRRA
501: KVVASARQRG NDLFKASRFA EACAAYSEGL DKGEGGSAVL LCNRAACHAK LGRHEKAVED CNGALAVRPG YSKARLRRAD CNVKLERWEA SLRDYQVLIQ
601: ELPENEDVKK ALAEVEVKLK SQRN

Best Arabidopsis Sequence Match ( AT5G65160.1 )
(BLAST)

001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS

Arabidopsis Description

TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.