CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97591	Soybean	plastid	86.94	92.34
KRH59356	Soybean	plastid	49.83	67.6
KRH43206	Soybean	cytosol, plastid	61.68	65.51
CDY08814	Canola	cytosol, plastid	46.91	65.0
Bra006046.1-P	Field mustard	cytosol	43.3	56.5
CDX78366	Canola	cytosol	43.3	56.5
CDX81156	Canola	cytosol	42.44	55.38
Bra024360.1-P	Field mustard	mitochondrion	54.12	53.75
CDY68462	Canola	cytosol	53.95	53.31
AT5G65160.1	Thale cress	cytosol	53.95	52.95
CDX69861	Canola	cytosol, mitochondrion	50.34	52.32
Bra009058.1-P	Field mustard	cytosol, mitochondrion	50.34	52.32
Os02t0753500-01	Rice	cytosol	26.12	52.05
CDY40077	Canola	cytosol	51.37	52.0
CDX85779	Canola	cytosol	51.37	52.0
CDY21634	Canola	cytosol, mitochondrion	50.0	51.96
Solyc04g055000.2.1	Tomato	cytosol	52.23	51.79
PGSC0003DMT400053133	Potato	cytosol, plastid	52.75	51.25
AT5G10090.1	Thale cress	cytosol	52.23	51.18
HORVU4Hr1G024490.1	Barley	cytosol	26.63	48.44
VIT_00s0304g00060.t01	Wine grape	plastid	57.22	46.7
KRH08675	Soybean	cytosol, mitochondrion, plastid	26.12	45.24
GSMUA_Achr11P...	Banana	plastid	43.99	43.76
KRH15375	Soybean	cytosol	18.38	42.8
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	42.1	42.76
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	41.58	41.37
KXG30730	Sorghum	cytosol, plastid	41.92	41.36
Zm00001d018088_P001	Maize	cytosol	40.55	40.0
TraesCS6A01G301400.1	Wheat	mitochondrion	40.55	39.73
GSMUA_Achr3P24690_001	Banana	cytosol	45.36	38.88
HORVU6Hr1G074660.5	Barley	plastid	41.41	38.62
KRH62368	Soybean	cytosol	39.86	35.47
KRH53085	Soybean	cytosol	40.72	33.95
KRH18895	Soybean	cytosol	40.89	33.85
KRH16702	Soybean	nucleus	40.03	33.57
KRH22291	Soybean	plastid	30.76	30.65
KRH55099	Soybean	nucleus	33.68	28.91
KRH26223	Soybean	nucleus	33.51	28.85
KRH21985	Soybean	cytosol	34.02	28.61
KRH27330	Soybean	cytosol	33.51	27.94
Bra028602.1-P	Field mustard	cytosol	51.37	27.46
KRH27037	Soybean	nucleus	31.62	27.26
KRG99844	Soybean	cytosol	8.08	17.54
KRH46794	Soybean	cytosol	8.08	17.03
KRH23391	Soybean	cytosol	4.98	16.2
KRH09945	Soybean	cytosol, endoplasmic reticulum	0.0	0.0

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100811282	MapMan:35.1	EMBL:ACUP02007137	ncoils:Coil	EnsemblPlantsGene:GLYMA_11G239500
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1LNL6	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	EnsemblPlants:KRH31282	ProteinID:KRH31282	ProteinID:KRH31282.1	PFAM:PF00515	PFAM:PF13414
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF360	MetaCyc:PWY-4361	MetaCyc:PWY-7174
SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat
UniParc:UPI000233D551	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:33390513..33393441

Molecular Weight (calculated)

64578.8 Da

IEP (calculated)

9.375

GRAVY (calculated)

-0.782

Length

582 amino acids

Sequence
(BLAST)

001: MGGNSPERKP GCGLMTAVFR RNNPWSRKSV SAGSSPMAHN FEKPSNTQDS KRRHGGSNDF VPIKESSHNN NNNDVTNYSS RSVPNPQRPT TPHVVSQRKP
101: QQNRDETTMG KGSSPSPTQG YINQGKRVPK EAVGISGELE SMINEHLKSK GSSTLGNLGN LRQGGVGPKH HNAYSEMDYY ASNVASGGHT NQITGREYDK
201: TSFYGKEAKP SKEQSGSLCR AVSTRMDPEQ LKIMGNEDYK NGRFAEALAL YDAAIAIDPN KASYRSNRSA ALTALGRLLE AVFECREAIR IESHYQRAHH
301: RLGNLNLRLG ETDKALYHYK QAGPDADPDE IVKAKTLQVY LNKCTEARRF GDWITLITAT NNAISSGADS APQIYALQAE ALLKLHRHQD ADKVMSRCPK
401: FDVDQCTRFF GPIGNANLLV TRAQVDLVAG RFEEALEAAQ KATRLDSNSR EANKVMRKAR ALTSARAKGN ELFKASNFHE ACIAYGEGLD HDPYNSVLLC
501: NRAACRSKLG QFEKAIDDCN TALNLRPSYI KARLRRADCN AKLERWEASI QDYEILLKET PEDEEVKRAL MEVQAQLEKQ AR

Best Arabidopsis Sequence Match ( AT5G65160.1 )
(BLAST)

001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS

Arabidopsis Description

TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.