CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09945	Soybean	cytosol, endoplasmic reticulum	26.26	81.03
Bra011197.1-P	Field mustard	cytosol	30.17	65.85
CDX68662	Canola	endoplasmic reticulum, mitochondrion	34.64	60.78
CDY28190	Canola	extracellular	34.08	59.8
TraesCS5B01G335700.1	Wheat	cytosol	68.16	53.28
TraesCS5A01G336700.1	Wheat	cytosol	68.16	53.28
KRG99844	Soybean	cytosol	79.33	52.99
TraesCS5D01G341400.1	Wheat	cytosol	67.6	52.84
Os10t0486900-01	Rice	cytosol	67.04	50.85
GSMUA_Achr2P02050_001	Banana	cytosol	64.25	50.44
KRH46794	Soybean	cytosol	73.74	47.83
Solyc07g006180.2.1	Tomato	cytosol	68.72	47.13
Zm00001d034423_P001	Maize	cytosol	64.8	46.77
KXG33951	Sorghum	cytosol	65.92	46.64
Zm00001d012121_P002	Maize	cytosol	64.25	45.1
CDY65185	Canola	cytosol	68.16	44.04
Bra032136.1-P	Field mustard	cytosol	68.16	44.04
CDX72245	Canola	cytosol	64.25	43.73
CDY39682	Canola	cytosol	67.6	43.68
AT4G30480.2	Thale cress	cytosol	67.04	43.32
PGSC0003DMT400029173	Potato	cytosol	68.16	41.64
VIT_11s0037g01020.t01	Wine grape	cytosol	55.87	40.98
KRH08675	Soybean	cytosol, mitochondrion, plastid	13.41	7.14
KRH59356	Soybean	plastid	16.76	6.99
KRH62368	Soybean	cytosol	24.58	6.73
KRH22291	Soybean	plastid	21.23	6.51
KRH27330	Soybean	cytosol	25.14	6.45
KRH26223	Soybean	nucleus	24.02	6.36
KRH21985	Soybean	cytosol	24.58	6.36
KRH55099	Soybean	nucleus	24.02	6.34
KRH16702	Soybean	nucleus	24.58	6.34
KRH53085	Soybean	cytosol	24.02	6.16
KRH18895	Soybean	cytosol	24.02	6.12
KRH27037	Soybean	nucleus	22.35	5.93
KRH43206	Soybean	cytosol, plastid	16.76	5.47
KRG97591	Soybean	plastid	16.2	5.29
KRH31282	Soybean	plastid	16.2	4.98
KRH15375	Soybean	cytosol	5.59	4.0

Protein Annotations

EMBL:ACUP02008462	EnsemblPlants:KRH23391	EnsemblPlantsGene:GLYMA_13G3542002	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR22904
PANTHER:PTHR22904:SF356	PFscan:PS50293	ProteinID:KRH23391	ProteinID:KRH23391.1	SUPFAM:SSF48452	UniParc:UPI0006ED68C6
UniProt:A0A0R0HB45	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:44259542..44262467

Molecular Weight (calculated)

19857.9 Da

IEP (calculated)

9.948

GRAVY (calculated)

-0.548

Length

179 amino acids

Sequence
(BLAST)

001: KALDQANDAK VEGNKLFGDG KYEEPLSQYE LALQVAPNMP SSVKIRSICH SNSGVCFLKL GKYDNTNKEC TKALELNPVY VKALVRRGEA HESLSILKRP
101: LLLADMKKIL EIVPSNDQAR KTIRRLEPLS AEKTRKDEGG NAKLKEMGNS VLGRFGMSVD NFKSVKDPNT GSFSVSFQR

Best Arabidopsis Sequence Match ( AT4G30480.2 )
(BLAST)

001: MVLIESSESE DEILIKNEPK PASSSSPQPT ETKQVDGDDS DGFETASERE ISDEEGEEDG TKNDAVTSQE EPQHSEKKEE QIELMSEGEA IVDDGSNKEK
101: ALAEANEAKA EGNKLFVNGL YEEALSKYAF ALELVQELPE SIELRSICYL NRGVCFLKLG KCEETIKECT KALELNPTYN KALVRRAEAH EKLEHFEDAV
201: TDLKKILELD PSNDQARKGI RRLEPLAAEK REKMKEEAIT KLKEMGNSIL GRFGMSVDNF KAVKDPNTGS YSLSFQN

Arabidopsis Description

TPR1AT4G30480 protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.