Factsheet for Os10t0486900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G336700.1	Wheat	cytosol	81.78	84.28
TraesCS5B01G335700.1	Wheat	cytosol	80.93	83.41
TraesCS5D01G341400.1	Wheat	cytosol	80.51	82.97
KRH09945	Soybean	cytosol, endoplasmic reticulum	20.34	82.76
KXG33951	Sorghum	cytosol	85.17	79.45
Zm00001d012121_P002	Maize	cytosol	83.9	77.65
Zm00001d034423_P001	Maize	cytosol	81.36	77.42
Bra011197.1-P	Field mustard	cytosol	25.85	74.39
GSMUA_Achr2P02050_001	Banana	cytosol	65.25	67.54
KRH23391	Soybean	cytosol	50.85	67.04
CDX68662	Canola	endoplasmic reticulum, mitochondrion	28.81	66.67
CDY28190	Canola	extracellular	28.39	65.69
KRG99844	Soybean	cytosol	63.98	56.34
Solyc07g006180.2.1	Tomato	cytosol	60.17	54.41
VIT_11s0037g01020.t01	Wine grape	cytosol	52.97	51.23
CDX72245	Canola	cytosol	56.78	50.95
Bra032136.1-P	Field mustard	cytosol	59.75	50.9
CDY39682	Canola	cytosol	59.32	50.54
CDY65185	Canola	cytosol	58.9	50.18
KRH46794	Soybean	cytosol	57.63	49.28
AT4G30480.2	Thale cress	cytosol	57.63	49.1
PGSC0003DMT400029173	Potato	cytosol	59.75	48.12
Os02t0753500-01	Rice	cytosol	16.53	13.36
Os05t0210600-01	Rice	cytosol	19.07	11.22
Os01t0218200-00	Rice	plastid	23.73	8.33
Os05t0587300-01	Rice	cytosol	18.22	7.75
Os01t0616333-01	Rice	cytosol, plastid	1.69	3.31
Os01t0616300-01	Rice	cytosol	0.42	1.61

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	EntrezGene:4348950	ProteinID:AAP54357.2	EMBL:AK063937	ProteinID:BAF26818.1
ProteinID:BAT11390.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051879	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	EnsemblPlantsGene:Os10g0486900	EnsemblPlants:Os10t0486900-01	PFAM:PF00515	PFAM:PF07719
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF356	UniProt:Q7XD86	SMART:SM00028
SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_2	InterPro:TPR_repeat
UniParc:UPI0000DB3F04	RefSeq:XP_015612856.1	SEG:seg	:	:	:

Description

Tetratricopeptide-like helical domain containing protein. (Os10t0486900-01)

Coordinates

chr10:+:18420721..18425369

Molecular Weight (calculated)

26068.3 Da

IEP (calculated)

4.358

GRAVY (calculated)

-0.708

Length

236 amino acids

Sequence
(BLAST)

001: MVVIEQEPEV EETPAAAEEP AAEEQAAGGA AGGEAARADG EDEEEAFEDA LTDEQLREKA RSQANDAKAE GNKFFGAGEY ERALSQYETA LQIAAELESA
101: EDIRSACHSN RAVCFLKLGK YDETIKECTK ALELNPSYLK ALLRRGEAHE KLEHYDEAIA DMKKIIELDP SNEQAKRSLF RLEPLAAEKR EKMKEEMIGK
201: LKDLGNSVLG RFGMSVDNFK AVKDPNTGSY SISFQQ

Best Arabidopsis Sequence Match ( AT4G30480.2 )
(BLAST)

001: MVLIESSESE DEILIKNEPK PASSSSPQPT ETKQVDGDDS DGFETASERE ISDEEGEEDG TKNDAVTSQE EPQHSEKKEE QIELMSEGEA IVDDGSNKEK
101: ALAEANEAKA EGNKLFVNGL YEEALSKYAF ALELVQELPE SIELRSICYL NRGVCFLKLG KCEETIKECT KALELNPTYN KALVRRAEAH EKLEHFEDAV
201: TDLKKILELD PSNDQARKGI RRLEPLAAEK REKMKEEAIT KLKEMGNSIL GRFGMSVDNF KAVKDPNTGS YSLSFQN

Arabidopsis Description

TPR1AT4G30480 protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.