Factsheet for Bra011197.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09945	Soybean	cytosol, endoplasmic reticulum	59.76	84.48
CDY28190	Canola	extracellular	93.9	75.49
CDX68662	Canola	endoplasmic reticulum, mitochondrion	92.68	74.51
KRH23391	Soybean	cytosol	65.85	30.17
GSMUA_Achr2P02050_001	Banana	cytosol	78.05	28.07
AT4G30480.2	Thale cress	cytosol	91.46	27.08
TraesCS5A01G336700.1	Wheat	cytosol	74.39	26.64
TraesCS5D01G341400.1	Wheat	cytosol	73.17	26.2
TraesCS5B01G335700.1	Wheat	cytosol	73.17	26.2
Os10t0486900-01	Rice	cytosol	74.39	25.85
Bra032136.1-P	Field mustard	cytosol	85.37	25.27
KRG99844	Soybean	cytosol	79.27	24.25
Zm00001d034423_P001	Maize	cytosol	71.95	23.79
Solyc07g006180.2.1	Tomato	cytosol	75.61	23.75
KXG33951	Sorghum	cytosol	70.73	22.92
Zm00001d012121_P002	Maize	cytosol	70.73	22.75
PGSC0003DMT400029173	Potato	cytosol	74.39	20.82
KRH46794	Soybean	cytosol	64.63	19.2
VIT_11s0037g01020.t01	Wine grape	cytosol	45.12	15.16
Bra023795.1-P	Field mustard	cytosol	6.1	5.68
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	13.41	3.37
Bra000267.1-P	Field mustard	cytosol	17.07	2.08
Bra007405.1-P	Field mustard	cytosol	17.07	2.08
Bra038116.1-P	Field mustard	cytosol	14.63	1.82
Bra030946.1-P	Field mustard	cytosol, plastid	14.63	1.79
Bra004709.1-P	Field mustard	cytosol	13.41	1.67
Bra023793.1-P	Field mustard	cytosol	7.32	1.46
Bra021583.1-P	Field mustard	nucleus	13.41	1.46
Bra027292.1-P	Field mustard	cytosol	10.98	1.23
Bra003657.1-P	Field mustard	cytosol	7.32	1.17
Bra009058.1-P	Field mustard	cytosol, mitochondrion	6.1	0.89
Bra015628.1-P	Field mustard	cytosol	3.66	0.57
Bra024360.1-P	Field mustard	mitochondrion	2.44	0.34
Bra028602.1-P	Field mustard	cytosol	3.66	0.28
Bra006046.1-P	Field mustard	cytosol	1.22	0.22

Protein Annotations

EnsemblPlants:Bra011197.1	EnsemblPlants:Bra011197.1-P	EnsemblPlantsGene:Bra011197	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0051879	ncoils:Coil	PANTHER:PTHR22904	PANTHER:PTHR22904:SF356	SEG:seg	UniParc:UPI0002546D9B
UniProt:M4D3Z3	MapMan:35.2	:	:	:	:

Description

AT4G30480 (E=2e-026) | tetratricopeptide repeat (TPR)-containing protein

Coordinates

chrA01:-:3385375..3385935

Molecular Weight (calculated)

9337.4 Da

IEP (calculated)

9.721

GRAVY (calculated)

-0.646

Length

82 amino acids

Sequence
(BLAST)

1: MVLIESNLKK ILELNPPNDQ ARKAIQRLEP LAAEKREKMK EEAITKLKEM ENSILGRFGM SVDNFKAVKD PNTGSYSLSF QN

Best Arabidopsis Sequence Match ( AT4G30480.2 )
(BLAST)

001: MVLIESSESE DEILIKNEPK PASSSSPQPT ETKQVDGDDS DGFETASERE ISDEEGEEDG TKNDAVTSQE EPQHSEKKEE QIELMSEGEA IVDDGSNKEK
101: ALAEANEAKA EGNKLFVNGL YEEALSKYAF ALELVQELPE SIELRSICYL NRGVCFLKLG KCEETIKECT KALELNPTYN KALVRRAEAH EKLEHFEDAV
201: TDLKKILELD PSNDQARKGI RRLEPLAAEK REKMKEEAIT KLKEMGNSIL GRFGMSVDNF KAVKDPNTGS YSLSFQN

Arabidopsis Description

TPR1AT4G30480 protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.