Factsheet for TraesCS5B01G335700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G341400.1	Wheat	cytosol	99.13	99.13
TraesCS5A01G336700.1	Wheat	cytosol	98.25	98.25
KRH09945	Soybean	cytosol, endoplasmic reticulum	20.96	82.76
Os10t0486900-01	Rice	cytosol	83.41	80.93
Zm00001d034423_P001	Maize	cytosol	81.22	75.0
KXG33951	Sorghum	cytosol	82.53	74.7
Zm00001d012121_P002	Maize	cytosol	81.66	73.33
Bra011197.1-P	Field mustard	cytosol	26.2	73.17
KRH23391	Soybean	cytosol	53.28	68.16
GSMUA_Achr2P02050_001	Banana	cytosol	66.81	67.11
CDX68662	Canola	endoplasmic reticulum, mitochondrion	29.26	65.69
CDY28190	Canola	extracellular	28.82	64.71
KRG99844	Soybean	cytosol	64.63	55.22
Solyc07g006180.2.1	Tomato	cytosol	60.7	53.26
Bra032136.1-P	Field mustard	cytosol	62.88	51.99
CDY65185	Canola	cytosol	62.88	51.99
CDY39682	Canola	cytosol	62.45	51.62
CDX72245	Canola	cytosol	57.21	49.81
KRH46794	Soybean	cytosol	58.95	48.91
AT4G30480.2	Thale cress	cytosol	58.95	48.74
VIT_11s0037g01020.t01	Wine grape	cytosol	51.53	48.36
PGSC0003DMT400029173	Potato	cytosol	60.26	47.1
TraesCS3B01G162100.1	Wheat	cytosol	25.76	8.78
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	25.33	8.43
TraesCS1B01G462300.1	Wheat	cytosol	25.33	8.36
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	20.52	8.2

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0051879	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	PFAM:PF00515	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF356	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	EnsemblPlantsGene:TraesCS5B01G335700	EnsemblPlants:TraesCS5B01G335700.1	SEG:seg

Description

No Description!

Coordinates

chr5B:+:518955469..518959325

Molecular Weight (calculated)

25645.0 Da

IEP (calculated)

4.559

GRAVY (calculated)

-0.769

Length

229 amino acids

Sequence
(BLAST)

001: MVVIELEPEH EGEETKRPSS PPEFVEAPDP RGAEQDEEAF EDALTDEQLR EKARSQANDA KAEGNKHFAA GQYEDALSQY EIALQIAAEL ESSEDISSAC
101: HSNRAVCFLK LGKYDETIKE CTKALELNPS YLKALLRRGE AHEKLENYDD AIADMKKIIE LDPSNQQAKK SLFRLEPLAA EKKEKMKEEM LAKLKDLGNS
201: VLGRFGMSVD NFKAVKDPNT GSYSVSFQK

Best Arabidopsis Sequence Match ( AT4G30480.2 )
(BLAST)

001: MVLIESSESE DEILIKNEPK PASSSSPQPT ETKQVDGDDS DGFETASERE ISDEEGEEDG TKNDAVTSQE EPQHSEKKEE QIELMSEGEA IVDDGSNKEK
101: ALAEANEAKA EGNKLFVNGL YEEALSKYAF ALELVQELPE SIELRSICYL NRGVCFLKLG KCEETIKECT KALELNPTYN KALVRRAEAH EKLEHFEDAV
201: TDLKKILELD PSNDQARKGI RRLEPLAAEK REKMKEEAIT KLKEMGNSIL GRFGMSVDNF KAVKDPNTGS YSLSFQN

Arabidopsis Description

TPR1AT4G30480 protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.