Factsheet for Solyc07g006180.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029173	Potato	cytosol	96.55	86.01
KRH09945	Soybean	cytosol, endoplasmic reticulum	18.01	81.03
Bra011197.1-P	Field mustard	cytosol	23.75	75.61
KRH23391	Soybean	cytosol	47.13	68.72
CDX68662	Canola	endoplasmic reticulum, mitochondrion	26.05	66.67
CDY28190	Canola	extracellular	25.67	65.69
GSMUA_Achr2P02050_001	Banana	cytosol	54.79	62.72
TraesCS5A01G336700.1	Wheat	cytosol	53.64	61.14
TraesCS5B01G335700.1	Wheat	cytosol	53.26	60.7
TraesCS5D01G341400.1	Wheat	cytosol	52.87	60.26
Os10t0486900-01	Rice	cytosol	54.41	60.17
KRG99844	Soybean	cytosol	60.92	59.33
KXG33951	Sorghum	cytosol	56.32	58.1
CDX72245	Canola	cytosol	58.24	57.79
Zm00001d034423_P001	Maize	cytosol	54.79	57.66
Zm00001d012121_P002	Maize	cytosol	55.17	56.47
AT4G30480.2	Thale cress	cytosol	58.62	55.23
Bra032136.1-P	Field mustard	cytosol	57.47	54.15
CDY65185	Canola	cytosol	57.47	54.15
CDY39682	Canola	cytosol	57.09	53.79
VIT_11s0037g01020.t01	Wine grape	cytosol	49.81	53.28
KRH46794	Soybean	cytosol	55.56	52.54
Solyc10g007430.1.1	Tomato	cytosol, plastid	18.01	12.43
Solyc10g007420.2.1	Tomato	cytosol	18.01	11.06
Solyc04g073940.2.1	Tomato	cytosol	21.46	10.31
Solyc10g007220.1.1	Tomato	cytosol	18.01	9.31
Solyc10g007230.1.1	Tomato	cytosol	20.69	9.06
Solyc10g007240.1.1	Tomato	cytosol	19.92	8.75
Solyc07g062580.2.1	Tomato	cytosol	23.37	8.7
Solyc10g007250.1.1	Tomato	cytosol	8.43	7.89
Solyc04g055000.2.1	Tomato	cytosol	15.33	6.81

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0051879
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K4CB89	PFAM:PF00515	PFAM:PF07719
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF356	SMART:SM00028	SUPFAM:SSF48452
EnsemblPlantsGene:Solyc07g006180.2	EnsemblPlants:Solyc07g006180.2.1	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_2
InterPro:TPR_repeat	UniParc:UPI000276C3B3	:	:	:	:

Description

No Description!

Coordinates

chr7:-:1007742..1013158

Molecular Weight (calculated)

28838.6 Da

IEP (calculated)

4.729

GRAVY (calculated)

-0.731

Length

261 amino acids

Sequence
(BLAST)

001: MVSIEQVESP AAGKTSTAAE APSGYVSDGY ETASDSELNG AENGSNRESE NTINTASSSS DGDFLKEKTQ EQQPEVNQEQ LNEKALAQAN DAKVEGNALF
101: KDGLYEEALS KYELALQVAA DIPSSTEIRS ICHANRAACF TKLGKHEETI KECTKALELN PTYIKALVRR AEAHEKLEHF EEAITDMTKI LELEPSHDQA
201: RRTVIRLKPL ADEKREKMKE EMIGKLKEMG NSILGRFGMS VDNFKTVKDP NTGSYSVQFQ K

Best Arabidopsis Sequence Match ( AT4G30480.2 )
(BLAST)

001: MVLIESSESE DEILIKNEPK PASSSSPQPT ETKQVDGDDS DGFETASERE ISDEEGEEDG TKNDAVTSQE EPQHSEKKEE QIELMSEGEA IVDDGSNKEK
101: ALAEANEAKA EGNKLFVNGL YEEALSKYAF ALELVQELPE SIELRSICYL NRGVCFLKLG KCEETIKECT KALELNPTYN KALVRRAEAH EKLEHFEDAV
201: TDLKKILELD PSNDQARKGI RRLEPLAAEK REKMKEEAIT KLKEMGNSIL GRFGMSVDNF KAVKDPNTGS YSLSFQN

Arabidopsis Description

TPR1AT4G30480 protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.