Factsheet for Solyc10g007240.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054803	Potato	cytosol	44.28	89.46
PGSC0003DMT400054904	Potato	cytosol	78.79	77.48
PGSC0003DMT400054902	Potato	cytosol	37.21	73.91
Solyc10g007230.1.1	Tomato	cytosol	69.36	69.13
Solyc10g007420.2.1	Tomato	cytosol	45.12	63.06
Solyc10g007220.1.1	Tomato	cytosol	46.8	55.05
Solyc10g007250.1.1	Tomato	cytosol	22.73	48.39
Solyc07g062580.2.1	Tomato	cytosol	53.2	45.08
VIT_19s0014g01470.t01	Wine grape	cytosol	50.67	43.43
KRH26223	Soybean	nucleus	48.65	42.75
KRH21985	Soybean	cytosol	49.49	42.49
KRH55099	Soybean	nucleus	48.32	42.33
KRH27330	Soybean	cytosol	49.66	42.26
CDY34224	Canola	cytosol	4.88	42.03
Bra038116.1-P	Field mustard	cytosol	46.13	41.64
Solyc10g007430.1.1	Tomato	cytosol, plastid	26.43	41.53
CDY25865	Canola	cytosol	45.96	41.49
Os05t0210600-01	Rice	cytosol	27.95	41.4
CDY45930	Canola	cytosol	45.62	41.12
GSMUA_Achr10P...	Banana	cytosol	45.96	40.93
Bra030946.1-P	Field mustard	cytosol, plastid	45.96	40.75
CDY02514	Canola	cytosol, plastid	45.96	40.75
CDY25722	Canola	cytosol, plastid	45.62	40.63
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	33.84	39.96
AT1G53300.1	Thale cress	cytosol	46.46	39.48
GSMUA_Achr7P24480_001	Banana	cytosol	43.1	39.45
GSMUA_Achr4P08560_001	Banana	cytosol	44.95	38.98
Zm00001d008930_P003	Maize	cytosol	43.77	38.52
TraesCS3B01G162100.1	Wheat	cytosol	43.43	38.39
Os01t0218200-00	Rice	plastid	43.43	38.39
Zm00001d039362_P002	Maize	cytosol	43.27	38.36
Zm00001d004494_P001	Maize	cytosol, mitochondrion	14.31	38.29
TraesCS3A01G143000.1	Wheat	cytosol	43.27	38.24
TraesCS3D01G144600.1	Wheat	cytosol	42.93	37.78
Bra023795.1-P	Field mustard	cytosol	5.56	37.5
EES01073	Sorghum	cytosol	42.76	37.3
EES02247	Sorghum	plastid	42.93	37.28
HORVU1Hr1G093390.2	Barley	cytosol	42.09	37.15
HORVU3Hr1G027650.2	Barley	mitochondrion	41.58	37.09
Zm00001d044479_P001	Maize	cytosol	42.42	37.0
GSMUA_Achr3P25160_001	Banana	cytosol	44.11	36.8
TraesCS3A01G221800.1	Wheat	cytosol	42.26	36.48
TraesCS1B01G462300.1	Wheat	cytosol	42.59	36.46
Zm00001d011352_P001	Maize	cytosol	41.75	36.42
TraesCS1D01G437100.1	Wheat	nucleus	42.76	36.39
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	42.09	36.34
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	42.09	36.34
TraesCS1A01G427400.1	Wheat	cytosol	42.42	36.15
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	41.75	36.05
OQU78515	Sorghum	cytosol	41.75	35.43
AT3G14950.1	Thale cress	cytosol	43.1	35.07
Os05t0587300-01	Rice	cytosol	32.15	34.41
CDY40820	Canola	mitochondrion	16.16	34.16
Bra027292.1-P	Field mustard	cytosol	41.92	33.92
CDX98517	Canola	cytosol	41.25	33.84
CDX97619	Canola	cytosol	41.25	33.79
CDY32327	Canola	cytosol	41.41	33.74
CDY20095	Canola	nucleus	41.25	33.65
Bra021583.1-P	Field mustard	nucleus	41.58	32.67
CDY34222	Canola	cytosol	16.84	32.47
GSMUA_AchrUn_...	Banana	cytosol	13.8	30.6
CDY34223	Canola	cytosol	16.16	29.45
Bra023793.1-P	Field mustard	cytosol	20.03	28.88
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	15.49	28.22
Solyc04g055000.2.1	Tomato	cytosol	27.27	27.6
Solyc04g073940.2.1	Tomato	cytosol	24.41	26.7
Zm00001d009724_P009	Maize	cytosol	40.24	22.36
Solyc07g006180.2.1	Tomato	cytosol	8.75	19.92
Zm00001d006366_P001	Maize	cytosol	0.34	0.86
Zm00001d033961_P001	Maize	cytosol	0.34	0.86

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.5	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:K4CXQ4	PFAM:PF00515	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF402	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF52833
EnsemblPlantsGene:Solyc10g007240.1	EnsemblPlants:Solyc10g007240.1.1	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat
InterPro:Thioredoxin-like_sf	UniParc:UPI000276B1C0	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:+:1660427..1662715

Molecular Weight (calculated)

65209.1 Da

IEP (calculated)

8.374

GRAVY (calculated)

-0.276

Length

594 amino acids

Sequence
(BLAST)

001: MNSTPLADRM KNDDPRILKL GSTLRTRMSC STTGSSGQSV SSSGTGNSGS GSSSSSSRVE IVPAGNICPS GKVITGMRSK PVRTVLSDNE MIPGMYGYGS
101: IMPAGATRRT CGVSSSDTPE SSLKINSEEL KAKGNENYKK GNFLEALYFY DKAIAISPSD GRLRCNRAAA LMGLKRMPEA LKECEEAIRL APAYVRAHQR
201: LGSLLLSLGH VENARKCLFS LNQIPDEAEL HKLETVENHI NKCTEARRLG EWTSVLKEAE AATSRGAEAS AQLFACQAEA HLKLHQLTDA ELWMYKAKMY
301: EASARAYKSK NFGMISEAYI LFVQAQIENT LGKFDNACAA IERAAQVDLQ SSEVIGLLKN MRLVGRARSL GNELFKSGRY IEACSAYGEG LSCDSLDPIL
401: YCNRAACWYK LKKWEKSLDD CNRALLIRPQ HTKALLRKAA SNIKLGRWAD AVRDYEILWQ ELPSSEEVAE NLSHARAELT KSHREGNGMV ELVSDVDKFR
501: AAIASGASVV YFHELSDPLC TWKSYVMGTL SAKYHSVIFL KVDMKQSPAI ATAENITVAS TFKLYKDGSC KVDMVTATPD LLEFSIRDTL LCPI

Best Arabidopsis Sequence Match ( AT3G58620.1 )
(BLAST)

001: MSHYRRHSLE PSITSKFRDS LSFQRDDDVI NKPDFRELDF GSPLRPRGSS SAAATPAASG SSSSSSGSAS GKPAVTSQFA RRSHSGELSG LSQTSPVKPG
101: SVNRNLKPGH RRSASAGTPL IYSGLGFSPV NNNNNSSRGG GSGATSPNPG VLPTGNICPS GRILKTGMAT RASVRPETLC TGTANYGHGN IIRTGGKVSH
201: ATKAAAEMSD SEEVKKAGNV MYRKGNYAEA LALYDRAISL SPENPAYRSN RAAALAASGR LEEAVKECLE AVRCDPSYAR AHQRLASLYL RLGEAENARR
301: HLCVSGQCPD QADLQRLQTL EKHLRLCTEA RKIGDWRTVI SEIDAAIANG ADSSPQLVAC KAEAFLRLHQ IKDSDLCISS IPRLDHHHTQ PPEKLFGIVC
401: DAYVLCVQAQ VDMALGRFEN AIVKVERAMT IDHSNSPEVV SVLNNVKNVA KARTRGNELF SSGRYSEASV AYGDGLKLDA FNSVLYCNRA ACWFKLGMWE
501: KSVDDCNQAL RIQPSYTKAL LRRAASYGKL GRWEDAVRDY EVLRKELPGD SEVAESLQRA RNALSNKSEE PKYLGFNNEV EEVSTLDKFK TATSLPGISV
601: FHFKSSSNRQ SEAISPFVNT LCLRYPLVHF FKVDVEESLA LAKAESIKKI PTFKIYKKGE KVKEMVCPSH QLLEDSVTHF LL

Arabidopsis Description

TTL4TTL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.