Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02247 | Sorghum | plastid | 94.48 | 92.54 |
| Zm00001d008930_P003 | Maize | cytosol | 92.84 | 92.15 |
| Os01t0218200-00 | Rice | plastid | 86.12 | 85.86 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 83.88 | 83.63 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 83.88 | 83.26 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 82.99 | 82.74 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 27.16 | 81.98 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 74.18 | 74.62 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 22.69 | 57.58 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 58.06 | 56.79 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 54.48 | 56.24 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 40.9 | 54.47 |
| KRH26223 | Soybean | nucleus | 54.78 | 54.29 |
| KRH55099 | Soybean | nucleus | 54.93 | 54.28 |
| Zm00001d044479_P001 | Maize | cytosol | 54.93 | 54.04 |
| Zm00001d011352_P001 | Maize | cytosol | 54.78 | 53.89 |
| KRH21985 | Soybean | cytosol | 55.37 | 53.61 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 54.78 | 52.96 |
| KRH22291 | Soybean | plastid | 46.12 | 52.91 |
| KRH27330 | Soybean | cytosol | 54.63 | 52.44 |
| CDY25865 | Canola | cytosol | 51.49 | 52.43 |
| Bra038116.1-P | Field mustard | cytosol | 51.49 | 52.43 |
| CDY02514 | Canola | cytosol, plastid | 51.94 | 51.94 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 51.94 | 51.94 |
| CDY45930 | Canola | cytosol | 51.04 | 51.9 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 55.07 | 51.83 |
| PGSC0003DMT400054803 | Potato | cytosol | 22.69 | 51.7 |
| CDY25722 | Canola | cytosol, plastid | 51.34 | 51.57 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 54.63 | 51.55 |
| PGSC0003DMT400032362 | Potato | cytosol | 52.84 | 50.57 |
| CDY61202 | Canola | cytosol | 50.6 | 50.52 |
| Bra000267.1-P | Field mustard | cytosol | 50.6 | 50.45 |
| Solyc07g062580.2.1 | Tomato | cytosol | 52.24 | 49.93 |
| CDY42827 | Canola | cytosol | 49.85 | 49.78 |
| AT2G42580.1 | Thale cress | cytosol | 51.19 | 49.64 |
| AT1G53300.1 | Thale cress | cytosol | 51.64 | 49.5 |
| CDY51514 | Canola | cytosol | 49.25 | 49.33 |
| AT3G58620.1 | Thale cress | cytosol | 50.15 | 49.27 |
| CDY55390 | Canola | cytosol | 49.1 | 49.18 |
| Bra004709.1-P | Field mustard | cytosol | 48.21 | 49.16 |
| Bra007405.1-P | Field mustard | cytosol | 48.36 | 48.14 |
| CDY34224 | Canola | cytosol | 4.93 | 47.83 |
| CDX71941 | Canola | cytosol | 48.06 | 47.77 |
| CDY49237 | Canola | cytosol | 47.46 | 47.68 |
| KRH27037 | Soybean | nucleus | 46.27 | 45.93 |
| PGSC0003DMT400054902 | Potato | cytosol | 20.0 | 44.82 |
| PGSC0003DMT400054904 | Potato | cytosol | 39.7 | 44.04 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.61 | 44.03 |
| Solyc10g007240.1.1 | Tomato | cytosol | 38.36 | 43.27 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 38.81 | 42.28 |
| Bra023795.1-P | Field mustard | cytosol | 5.52 | 42.05 |
| AT3G14950.1 | Thale cress | cytosol | 45.22 | 41.51 |
| Solyc10g007230.1.1 | Tomato | cytosol | 36.87 | 41.44 |
| PGSC0003DMT400054911 | Potato | cytosol | 31.79 | 40.88 |
| PGSC0003DMT400054909 | Potato | cytosol | 24.93 | 40.53 |
| Solyc10g007220.1.1 | Tomato | cytosol | 29.85 | 39.6 |
| Solyc10g007250.1.1 | Tomato | cytosol | 16.42 | 39.43 |
| Bra027292.1-P | Field mustard | cytosol | 42.84 | 39.1 |
| CDY32327 | Canola | cytosol | 42.54 | 39.09 |
| Solyc10g007420.2.1 | Tomato | cytosol | 24.78 | 39.06 |
| CDY20095 | Canola | nucleus | 42.24 | 38.87 |
| CDX98517 | Canola | cytosol | 41.79 | 38.67 |
| CDX97619 | Canola | cytosol | 41.79 | 38.62 |
| Bra021583.1-P | Field mustard | nucleus | 42.69 | 37.83 |
| PGSC0003DMT400091014 | Potato | nucleus | 33.13 | 36.57 |
| CDY40820 | Canola | mitochondrion | 15.07 | 35.94 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 20.0 | 35.45 |
| CDY34222 | Canola | cytosol | 16.12 | 35.06 |
| Zm00001d009724_P009 | Maize | cytosol | 53.88 | 33.77 |
| Bra023793.1-P | Field mustard | cytosol | 20.6 | 33.5 |
| CDY34223 | Canola | cytosol | 16.27 | 33.44 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 15.97 | 32.82 |
| Zm00001d052221_P002 | Maize | cytosol, nucleus, plastid | 27.76 | 31.79 |
| Zm00001d018088_P001 | Maize | cytosol | 26.42 | 30.0 |
| Zm00001d034423_P001 | Maize | cytosol | 9.55 | 25.81 |
| Zm00001d012121_P002 | Maize | cytosol | 9.25 | 24.31 |
| Zm00001d017669_P001 | Maize | cytosol | 0.3 | 0.86 |
| Zm00001d033961_P001 | Maize | cytosol | 0.3 | 0.86 |
| Zm00001d035258_P001 | Maize | cytosol | 0.3 | 0.86 |
| Zm00001d035261_P001 | Maize | cytosol | 0.3 | 0.86 |
| Zm00001d039774_P001 | Maize | cytosol | 0.3 | 0.86 |
| Zm00001d006366_P001 | Maize | cytosol | 0.3 | 0.86 |
| Zm00001d052005_P001 | Maize | cytosol | 0.3 | 0.86 |
| Zm00001d002746_P001 | Maize | cytosol | 0.3 | 0.86 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:103653343 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 |
| GO:GO:0045454 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 | UniProt:K7TYW1 |
| ProteinID:ONM28456.1 | PFAM:PF00085 | PFAM:PF00515 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR22904 | PANTHER:PTHR22904:SF402 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI00022133DA |
| EnsemblPlantsGene:Zm00001d039362 | EnsemblPlants:Zm00001d039362_P002 | EnsemblPlants:Zm00001d039362_T002 | SEG:seg | : | : |
Description
TPR repeat-containing thioredoxin TTL1
Coordinates
chr3:-:2569180..2574119
Molecular Weight (calculated)
72224.0 Da
IEP (calculated)
8.518
GRAVY (calculated)
-0.294
Length
670 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHRPPAPMP DTLSDAFAAA VLLSSTDKPD TLPPGRLSPV SPLPHSSKHG HHHPTPSSSS GSSGSVSRAP LAPASGLASR RSHSGEIPLP SEAPPRHRRT
101: GSGPLIFTSG ACSSSATSPL TNALPAGNIC PSGRLAKPLP SPCPVATPPP RASRHDVLGS GTANYGHGSI VRSRGGGAVP AATDDDAVLR RAMSAADPEE
201: VKRAGNDLYR KGCFEGALRL YDRALALCPD NAACRGNRAA ALIGLDRLGE AVKECEEALR IDPSYGRAHH RLASLHIRLG HIEDALKHLS LATPQPDLLE
301: LHKLQTVEKH LGRCLDARKA GDWKSVLRES DAAIAAGADS SALLLAARAE ALLRLNLLDE ADLAISSASK LDYTSSCSSD TKFCGFLANA YLFYVHAQID
401: MSSGRFDHAV SSIDKARIID PGNTEVVNMH NKVKSVARAR SLGNELFNSG KFSEACVAYG EGLKQHPMNK VLYCNRAACR FKLEQWEKSI EDCNEALKIQ
501: SNYTKALLRR AASYGKMERW VESVKDYEIL RKELPGDAEV AEAYFHAQVA LKSSRGEEVS NMKFGGEVET IIGMEQFQMA TSLPGVSVIH FMTPSNQQCC
601: KVSPFVNTLC ARYPSVNFLK VDVNESPAVA RAENVRTIPT FKIYKNGIRV KEMICPSQQL LEYSVRHFGI
101: GSGPLIFTSG ACSSSATSPL TNALPAGNIC PSGRLAKPLP SPCPVATPPP RASRHDVLGS GTANYGHGSI VRSRGGGAVP AATDDDAVLR RAMSAADPEE
201: VKRAGNDLYR KGCFEGALRL YDRALALCPD NAACRGNRAA ALIGLDRLGE AVKECEEALR IDPSYGRAHH RLASLHIRLG HIEDALKHLS LATPQPDLLE
301: LHKLQTVEKH LGRCLDARKA GDWKSVLRES DAAIAAGADS SALLLAARAE ALLRLNLLDE ADLAISSASK LDYTSSCSSD TKFCGFLANA YLFYVHAQID
401: MSSGRFDHAV SSIDKARIID PGNTEVVNMH NKVKSVARAR SLGNELFNSG KFSEACVAYG EGLKQHPMNK VLYCNRAACR FKLEQWEKSI EDCNEALKIQ
501: SNYTKALLRR AASYGKMERW VESVKDYEIL RKELPGDAEV AEAYFHAQVA LKSSRGEEVS NMKFGGEVET IIGMEQFQMA TSLPGVSVIH FMTPSNQQCC
601: KVSPFVNTLC ARYPSVNFLK VDVNESPAVA RAENVRTIPT FKIYKNGIRV KEMICPSQQL LEYSVRHFGI
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.