Factsheet for Zm00001d018088_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	83.22	83.93
KXG30730	Sorghum	cytosol, plastid	82.88	82.88
Os02t0753500-01	Rice	cytosol	40.34	81.51
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	68.98	71.03
TraesCS6A01G301400.1	Wheat	mitochondrion	65.25	64.81
HORVU6Hr1G074660.5	Barley	plastid	68.47	64.74
CDY08814	Canola	cytosol, plastid	36.44	51.19
GSMUA_Achr11P...	Banana	plastid	49.15	49.57
CDX78366	Canola	cytosol	37.29	49.33
Bra006046.1-P	Field mustard	cytosol	37.29	49.33
CDX81156	Canola	cytosol	37.29	49.33
KRH59356	Soybean	plastid	31.86	43.82
CDX85779	Canola	cytosol	41.53	42.61
PGSC0003DMT400022057	Potato	plastid	31.53	42.56
CDY40077	Canola	cytosol	41.36	42.43
KRH43206	Soybean	cytosol, plastid	39.32	42.34
Bra024360.1-P	Field mustard	mitochondrion	41.69	41.98
AT5G10090.1	Thale cress	cytosol	42.2	41.92
CDY68462	Canola	cytosol	41.69	41.77
KRH08675	Soybean	cytosol, mitochondrion, plastid	23.73	41.67
AT5G65160.1	Thale cress	cytosol	41.86	41.65
KRH15375	Soybean	cytosol	17.63	41.6
CDX69861	Canola	cytosol, mitochondrion	38.64	40.71
Bra009058.1-P	Field mustard	cytosol, mitochondrion	38.64	40.71
KRG97591	Soybean	plastid	37.8	40.69
KRH31282	Soybean	plastid	40.0	40.55
Solyc04g055000.2.1	Tomato	cytosol	40.0	40.2
CDY21634	Canola	cytosol, mitochondrion	37.97	40.0
PGSC0003DMT400053133	Potato	cytosol, plastid	40.17	39.57
AT1G78120.1	Thale cress	cytosol	34.41	38.3
CDX88420	Canola	cytosol	34.07	38.21
Bra015628.1-P	Field mustard	cytosol	33.9	38.02
Zm00001d004494_P001	Maize	cytosol, mitochondrion	14.24	37.84
CDX87474	Canola	cytosol	33.73	37.83
VIT_00s0304g00060.t01	Wine grape	plastid	45.59	37.73
Bra003657.1-P	Field mustard	cytosol	32.71	37.7
CDX68030	Canola	cytosol	32.37	37.52
CDX79246	Canola	cytosol	32.37	37.3
PGSC0003DMT400045666	Potato	cytosol	33.39	36.15
Solyc04g073940.2.1	Tomato	cytosol	33.05	35.91
VIT_18s0001g05380.t01	Wine grape	plastid	40.85	34.09
KRH62368	Soybean	cytosol	35.25	31.8
KRH53085	Soybean	cytosol	35.08	29.66
KRH18895	Soybean	cytosol	34.92	29.3
KRH16702	Soybean	nucleus	33.73	28.67
Zm00001d044479_P001	Maize	cytosol	31.69	27.46
Zm00001d011352_P001	Maize	cytosol	31.69	27.46
Zm00001d008930_P003	Maize	cytosol	31.19	27.26
Zm00001d039362_P002	Maize	cytosol	30.0	26.42
Bra028602.1-P	Field mustard	cytosol	41.36	22.41
Zm00001d034423_P001	Maize	cytosol	9.32	22.18
Zm00001d012121_P002	Maize	cytosol	9.32	21.57
Zm00001d009724_P009	Maize	cytosol	31.36	17.31
Zm00001d017669_P001	Maize	cytosol	0.0	0.0
Zm00001d033961_P001	Maize	cytosol	0.0	0.0
Zm00001d035258_P001	Maize	cytosol	0.0	0.0
Zm00001d035261_P001	Maize	cytosol	0.0	0.0
Zm00001d039774_P001	Maize	cytosol	0.0	0.0
Zm00001d006366_P001	Maize	cytosol	0.0	0.0
Zm00001d052005_P001	Maize	cytosol	0.0	0.0
Zm00001d002746_P001	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A1D6HKP2	ProteinID:AQK74997.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	PFAM:PF00515	PFAM:PF13432
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF360	SMART:SM00028	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000220A85E	EnsemblPlantsGene:Zm00001d018088
EnsemblPlants:Zm00001d018088_P001	EnsemblPlants:Zm00001d018088_T001	SEG:seg	:	:	:

Description

Tetratricopeptide repeat (TPR)-like superfamily protein

Coordinates

chr5:-:213988699..213992015

Molecular Weight (calculated)

64007.8 Da

IEP (calculated)

9.415

GRAVY (calculated)

-0.476

Length

590 amino acids

Sequence
(BLAST)

001: MTEPRDPPTG CALFGIYNGM FRRRRSASMT SLHRINGAEA EAEAAAPPNQ KPAAHRDSSL ARRPSAMPVP AAAQNGRSRP AAKAAPAAEP AAEYSGMAAE
101: LDRMILDHQR VKGTAQLVRA TSGNMMLHRN LGNLNAGGRA ANERKAPHGY ASSGMGNIVR EPRPAPAAGG QLCRALSHRT DPEKLKEMGN EEYRQGHYAE
201: AVALYDQAII MDASRPAYWS NKAAALAALG RLIEAVADCK EAVRIDPSYD RAHHRLAGLY LRYRVHLADF QIRERHSLQI SAIHCLAPPS CHCSSNSAST
301: LRHQLCGEPD KAIYHMKQSS NESAGADVSR AQSVKSRIAR SNDARRLKNW ITVLQEAQAA VADGADCAPQ VMALQAEALL RLQRHDEADS LLSGAGAPRF
401: GVDESTKFFG TFGHAYFLIV RAQVDMAAGR FEDAVATAQT AFQLDPSNRE VSVVQRRAKA AAAARLRGND LFKAAKFAEA CAAYGEGLDR EPGNAVLLCN
501: RAACHAKLGR HEKAVEDCSA ALDVRPSYSK ARLRRADCNV KLERWEASLR DYQVLVQELP ENEDVKKALS EVEAKLKGQR HGAAAARSQH

Best Arabidopsis Sequence Match ( AT5G65160.1 )
(BLAST)

001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS

Arabidopsis Description

TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.