CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15375	Soybean	cytosol	45.83	61.6
KRH62368	Soybean	cytosol	74.11	38.07
KRH53085	Soybean	cytosol	71.43	34.38
Os02t0753500-01	Rice	cytosol	27.98	32.19
PGSC0003DMT400022057	Potato	plastid	41.07	31.58
KRH59356	Soybean	plastid	38.69	30.3
KRH16702	Soybean	nucleus	61.9	29.97
KRH18895	Soybean	cytosol	61.31	29.3
AT1G78120.1	Thale cress	cytosol	46.13	29.25
KRH43206	Soybean	cytosol, plastid	47.02	28.83
CDX79246	Canola	cytosol	43.45	28.52
KRG97591	Soybean	plastid	46.43	28.47
Bra015628.1-P	Field mustard	cytosol	44.35	28.33
CDX88420	Canola	cytosol	44.35	28.33
Bra003657.1-P	Field mustard	cytosol	43.15	28.32
CDX87474	Canola	cytosol	44.05	28.14
HORVU4Hr1G024490.1	Barley	cytosol	26.49	27.81
CDX68030	Canola	cytosol	41.96	27.7
GSMUA_Achr11P...	Banana	plastid	46.73	26.84
Solyc04g073940.2.1	Tomato	cytosol	42.56	26.34
KRH31282	Soybean	plastid	45.24	26.12
PGSC0003DMT400045666	Potato	cytosol	41.07	25.32
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	43.45	24.96
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	41.07	24.08
VIT_18s0001g05380.t01	Wine grape	plastid	50.3	23.9
Zm00001d018088_P001	Maize	cytosol	41.67	23.73
KXG30730	Sorghum	cytosol, plastid	41.07	23.39
TraesCS6A01G301400.1	Wheat	mitochondrion	40.77	23.06
GSMUA_Achr3P24690_001	Banana	cytosol	45.83	22.68
HORVU6Hr1G074660.5	Barley	plastid	41.96	22.6
KRH22291	Soybean	plastid	34.23	19.69
KRH21985	Soybean	cytosol	37.8	18.35
KRH55099	Soybean	nucleus	36.9	18.29
KRH27330	Soybean	cytosol	37.2	17.91
KRH26223	Soybean	nucleus	36.01	17.9
KRH27037	Soybean	nucleus	35.12	17.48
KRG99844	Soybean	cytosol	10.71	13.43
KRH23391	Soybean	cytosol	7.14	13.41
KRH46794	Soybean	cytosol	9.52	11.59
KRH09945	Soybean	cytosol, endoplasmic reticulum	0.0	0.0

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A0R0FZE5	EMBL:ACUP02010192	EnsemblPlantsGene:GLYMA_16G165700	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	EnsemblPlants:KRH08675	ProteinID:KRH08675	ProteinID:KRH08675.1	PFAM:PF13414
PFAM:PF13431	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF360	SMART:SM00028	SUPFAM:SSF48452
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0006EDDA8A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr16:+:32475728..32483574

Molecular Weight (calculated)

38135.8 Da

IEP (calculated)

9.482

GRAVY (calculated)

-0.335

Length

336 amino acids

Sequence
(BLAST)

001: MRRNIFTGYI IGNRLNFKTF FEPIIDFIEI DINEVKKKKE RHQWGYQLFK DLMMKTPPVQ DYIGNGDLPP DRIRSALVGN DFKKLYKQGR FEEALALYDR
101: AIAIDSKKAT YHCNKSAALI SLGRFLQVIV ECEEAIRLEP SYGRAHTHLA TIYFRLREAE KALNCNETSP CVDSVLAFQA QALQNHLSKY TEARKVKDWK
201: VILKESQAAI SLGADSAPLV SWFEDAVTTS QQASKLDPSS FEVNAVVRRA RAVASARMSG NLLFKASKFT EASAVYNEGL EHDPYNSVLL CNRATCHSKL
301: GQFKKAIEDC NVALIVQPSY SKVRLRRTDY NVKVHP

Best Arabidopsis Sequence Match ( AT1G78120.1 )
(BLAST)

001: MAKSKKISTG QIFGCESLLG CIFQSWSPRR RKPSLPEKDH RAKDNLSSKS STTVTNPKIL PRKSTDTSSQ PKKSDSQKPQ QKPKPDENHP RKSSESARKS
101: SDSARKSISS GSSRTESKRF SLNGVMGNII VKPQPAVKTD VTQTKSRWEG KPVNHRLDPE TLKKMGNEEY CRGRFGQALV FYERAISADP KTPTYWSNKS
201: AALISLGRLL EASDACEEAL RLNPTYERAH QRLASLQLRL GEVEKALCHY NEAGKYTETK HIEQVEDVVK CLRRCDEARR SKEWNVALKE TLFAISYGAD
301: SSPRVYALQT EALLHLQRHE EAYSVYQKGT KRFDIDSFIK IFGLSLTSYL LMVGAQVYIA VGRFEDAVTA SRQAARLDPS SEEVNAVARK ARAVASARLS
401: GNLLFNASKF EGASVVYTEG LENDPYNALL LCNRAASRFK LDLFEKAIED CTLALSLQPS YRKARRRRAD SYAKLEKWQH AIQDYELLMM ETPEDEETRR
501: ALTEVNVRFK KQTGGDVRFK GVGSELVVAN

Arabidopsis Description

TPR12TPR12 [Source:UniProtKB/TrEMBL;Acc:A0A178W863]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.