Factsheet for PGSC0003DMT400045666

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g073940.2.1	Tomato	cytosol	93.94	94.29
PGSC0003DMT400022057	Potato	plastid	48.26	60.18
Os02t0753500-01	Rice	cytosol	24.22	45.21
KRH08675	Soybean	cytosol, mitochondrion, plastid	25.32	41.07
HORVU4Hr1G024490.1	Barley	cytosol	23.12	39.38
KRH15375	Soybean	cytosol	17.61	38.4
PGSC0003DMT400054803	Potato	cytosol	20.37	37.76
VIT_18s0001g05380.t01	Wine grape	plastid	48.81	37.62
GSMUA_Achr11P...	Banana	plastid	39.82	37.09
AT1G78120.1	Thale cress	cytosol	35.23	36.23
PGSC0003DMT400053133	Potato	cytosol, plastid	39.63	36.06
Bra003657.1-P	Field mustard	cytosol	33.39	35.55
CDX79246	Canola	cytosol	33.03	35.16
CDX68030	Canola	cytosol	32.48	34.77
CDX88420	Canola	cytosol	33.21	34.41
Bra015628.1-P	Field mustard	cytosol	32.84	34.03
CDX87474	Canola	cytosol	32.84	34.03
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	36.51	34.02
KRH62368	Soybean	cytosol	40.55	33.79
KXG30730	Sorghum	cytosol, plastid	36.15	33.39
Zm00001d018088_P001	Maize	cytosol	36.15	33.39
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	34.86	33.16
KRH18895	Soybean	cytosol	42.02	32.57
KRH16702	Soybean	nucleus	41.28	32.42
KRH53085	Soybean	cytosol	40.37	31.52
TraesCS6A01G301400.1	Wheat	mitochondrion	33.21	30.47
GSMUA_Achr3P24690_001	Banana	cytosol	37.61	30.19
HORVU6Hr1G074660.5	Barley	plastid	34.13	29.81
PGSC0003DMT400054902	Potato	cytosol	15.78	28.76
PGSC0003DMT400054909	Potato	cytosol	21.28	28.16
PGSC0003DMT400054911	Potato	cytosol	25.69	26.87
PGSC0003DMT400054796	Potato	cytosol, plastid	29.54	26.18
PGSC0003DMT400032362	Potato	cytosol	31.74	24.71
PGSC0003DMT400054904	Potato	cytosol	27.34	24.67
PGSC0003DMT400091014	Potato	nucleus	25.32	22.73
PGSC0003DMT400029173	Potato	cytosol	10.28	19.11

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:102597112	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:M1BI06	PFAM:PF13176
PFAM:PF13414	PFAM:PF13432	EnsemblPlantsGene:PGSC0003DMG400017715	PGSC:PGSC0003DMG400017715	EnsemblPlants:PGSC0003DMT400045666	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF360	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000296AE8B	RefSeq:XP_006354072.1	SEG:seg	:

Description

Heat shock protein binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400017715]

Coordinates

chr4:-:62962862..62965065

Molecular Weight (calculated)

61723.6 Da

IEP (calculated)

10.007

GRAVY (calculated)

-0.475

Length

545 amino acids

Sequence
(BLAST)

001: MAKIGEKSVE IQLGCGLVAA IFQRGNCKPI KQPVSQISKK KLSKPQPKPP SITLRNSISQ DRKHVRRSTS DGTRSSSKIN QSSNSSSTKK MSQVVNLVPN
101: THNLRRQSMF TSSDLSANGT LNHASSTGNI MLLGQLGNLK QQKRIQHVST DEKFILQKGR VLMGNIVNKL DSDVLKSMGN EHYKHGRFEQ AIALYNQAIA
201: INPKNACYYS NKSAALLSLN RLIEAVIECR EAIQLDPFYY NAQYRLARLY LRLGEAEKAL EHYEKSGPKV DRRDISEAQN LKRMIRNCIE AQRVKDYITL
301: LHMSENALPS GTDSAPQIFA MRAEALMKLH RHEEAYTIIQ KGPNFKTCLS TRIFGSAKTA YFLIIRAQVY TLVGRFDDGI STAQEAAKLD ISNEIIAILR
401: RIKGVASARV KGNEFFKESK YIEACCMYTE GLEQDPYNSV LLFNRATCRI KLGQFEKGLE DCNAALVLRP SYTMARVRRA DCYVKLERWE AAIQEFEMLL
501: QEKQGDEEVK RALIDAKIQL KREREEDQKQ RKLCNESNLV LVISN

Best Arabidopsis Sequence Match ( AT5G65160.1 )
(BLAST)

001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS

Arabidopsis Description

TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.