CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15375	Soybean	cytosol	34.56	90.4
KRH53085	Soybean	cytosol	92.2	86.39
KRH08675	Soybean	cytosol, mitochondrion, plastid	38.07	74.11
KRH16702	Soybean	nucleus	70.18	66.14
KRH18895	Soybean	cytosol	70.18	65.29
VIT_18s0001g05380.t01	Wine grape	plastid	55.96	51.77
Os02t0753500-01	Rice	cytosol	22.02	49.32
AT1G78120.1	Thale cress	cytosol	37.31	46.04
HORVU4Hr1G024490.1	Barley	cytosol	22.02	45.0
Bra015628.1-P	Field mustard	cytosol	36.09	44.87
KRH59356	Soybean	plastid	29.36	44.76
Bra003657.1-P	Field mustard	cytosol	35.02	44.73
CDX79246	Canola	cytosol	35.02	44.73
CDX87474	Canola	cytosol	35.93	44.68
CDX88420	Canola	cytosol	35.78	44.49
PGSC0003DMT400022057	Potato	plastid	29.66	44.39
CDX68030	Canola	cytosol	34.1	43.81
KRH43206	Soybean	cytosol, plastid	35.47	42.34
Solyc04g073940.2.1	Tomato	cytosol	34.1	41.07
GSMUA_Achr11P...	Banana	plastid	36.7	41.03
KRG97591	Soybean	plastid	34.1	40.69
PGSC0003DMT400045666	Potato	cytosol	33.79	40.55
GSMUA_Achr3P24690_001	Banana	cytosol	41.74	40.21
KRH31282	Soybean	plastid	35.47	39.86
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	33.03	36.92
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	31.8	36.3
KRH26223	Soybean	nucleus	37.31	36.09
KRH55099	Soybean	nucleus	37.16	35.84
KXG30730	Sorghum	cytosol, plastid	31.8	35.25
Zm00001d018088_P001	Maize	cytosol	31.8	35.25
KRH22291	Soybean	plastid	31.19	34.93
KRH21985	Soybean	cytosol	36.54	34.54
KRH27330	Soybean	cytosol	36.54	34.24
HORVU6Hr1G074660.5	Barley	plastid	32.26	33.81
TraesCS6A01G301400.1	Wheat	mitochondrion	30.43	33.5
KRH27037	Soybean	nucleus	31.96	30.96
KRH09945	Soybean	cytosol, endoplasmic reticulum	2.29	25.86
KRH23391	Soybean	cytosol	6.73	24.58
KRG99844	Soybean	cytosol	9.63	23.51
KRH46794	Soybean	cytosol	7.95	18.84

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100787041	Gene3D:3.40.30.10	MapMan:35.1	EMBL:ACUP02002236	ncoils:Coil
EnsemblPlantsGene:GLYMA_04G103400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	UniProt:I1JVG0	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR013766	InterPro:IPR019734	EnsemblPlants:KRH62368	ProteinID:KRH62368	ProteinID:KRH62368.1
PFAM:PF00085	PFAM:PF13181	PFAM:PF13414	PFAM:PF13431	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR22904	PANTHER:PTHR22904:SF360	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF52833	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI000233A233	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:9611225..9615074

Molecular Weight (calculated)

73156.6 Da

IEP (calculated)

9.612

GRAVY (calculated)

-0.460

Length

654 amino acids

Sequence
(BLAST)

001: MAGKTKNKVE VQLGCGLVGR IFHLKTNNRP RKSSVHSLPL KPCNTAQQRD QGKNESKAPP NHEPKDSSIE TIPTLKGEQN PARKSRQQQK DHPVVNSLEL
101: ARISTSTSHH QNYGTKSPAK EFVLPITGNL LVNSSPRTSV TKSKELNSLS GSCSYNSNST NKGMMGNIMR KNSDELGQFR SLRNSRVDPE VLKSMGNEAY
201: KQGRFEEALA LYDRAIAVDS KKATYHCNKS AALISLGRFL QAIVECEEAI RLEPSYGRAH TRLATIYFRL GEAEKALNCN ETSPCVDSVL AFQAQALQNH
301: LSKCTEARKV KDWKVILKES QAAISLGADS APLVYCLHTE ALLKLLRHQE AHATYEKMPK FDLDYSNKLF GPVRSAYLLM IGTHIYLATG RFEDAVIASQ
401: QASKLDPSSF EVNAVVRRAR AVASARMSGN LLFKASKFTE AYAVYNEGLE HDPFNSVLLC NRAACRSKLG QFEKAIEDCN VALIVQPSYS KARLRRADCN
501: AKLERWEAAI QDYEMLLREK PGDEEVARAL FETQLQLKTL RGEDIKDLKF GSNLFFISSN DRFRHYVTSP GMSVVLFCNK ATHKQVLLVL EQTCKRFPSV
601: NFLKVEIEDH PYLAKSEGVN CIPAFKIYKN GSRVKEIPGS NHDLLEKLVK LYSN

Best Arabidopsis Sequence Match ( AT1G78120.1 )
(BLAST)

001: MAKSKKISTG QIFGCESLLG CIFQSWSPRR RKPSLPEKDH RAKDNLSSKS STTVTNPKIL PRKSTDTSSQ PKKSDSQKPQ QKPKPDENHP RKSSESARKS
101: SDSARKSISS GSSRTESKRF SLNGVMGNII VKPQPAVKTD VTQTKSRWEG KPVNHRLDPE TLKKMGNEEY CRGRFGQALV FYERAISADP KTPTYWSNKS
201: AALISLGRLL EASDACEEAL RLNPTYERAH QRLASLQLRL GEVEKALCHY NEAGKYTETK HIEQVEDVVK CLRRCDEARR SKEWNVALKE TLFAISYGAD
301: SSPRVYALQT EALLHLQRHE EAYSVYQKGT KRFDIDSFIK IFGLSLTSYL LMVGAQVYIA VGRFEDAVTA SRQAARLDPS SEEVNAVARK ARAVASARLS
401: GNLLFNASKF EGASVVYTEG LENDPYNALL LCNRAASRFK LDLFEKAIED CTLALSLQPS YRKARRRRAD SYAKLEKWQH AIQDYELLMM ETPEDEETRR
501: ALTEVNVRFK KQTGGDVRFK GVGSELVVAN

Arabidopsis Description

TPR12TPR12 [Source:UniProtKB/TrEMBL;Acc:A0A178W863]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.