CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99844	Soybean	cytosol	77.17	79.48
KRH23391	Soybean	cytosol	47.83	73.74
Bra011197.1-P	Field mustard	cytosol	19.2	64.63
KRH09945	Soybean	cytosol, endoplasmic reticulum	13.04	62.07
GSMUA_Achr2P02050_001	Banana	cytosol	50.0	60.53
TraesCS5A01G336700.1	Wheat	cytosol	49.28	59.39
TraesCS5B01G335700.1	Wheat	cytosol	48.91	58.95
CDX68662	Canola	endoplasmic reticulum, mitochondrion	21.74	58.82
TraesCS5D01G341400.1	Wheat	cytosol	48.55	58.52
CDY28190	Canola	extracellular	21.38	57.84
Os10t0486900-01	Rice	cytosol	49.28	57.63
Solyc07g006180.2.1	Tomato	cytosol	52.54	55.56
CDX72245	Canola	cytosol	51.81	54.37
Zm00001d034423_P001	Maize	cytosol	48.19	53.63
AT4G30480.2	Thale cress	cytosol	53.62	53.43
KXG33951	Sorghum	cytosol	48.91	53.36
Zm00001d012121_P002	Maize	cytosol	47.83	51.76
Bra032136.1-P	Field mustard	cytosol	51.81	51.62
CDY39682	Canola	cytosol	51.45	51.26
CDY65185	Canola	cytosol	50.72	50.54
VIT_11s0037g01020.t01	Wine grape	cytosol	44.57	50.41
PGSC0003DMT400029173	Potato	cytosol	52.9	49.83
KRH08675	Soybean	cytosol, mitochondrion, plastid	11.59	9.52
KRH59356	Soybean	plastid	14.13	9.09
KRH15375	Soybean	cytosol	7.61	8.4
KRH31282	Soybean	plastid	17.03	8.08
KRH16702	Soybean	nucleus	20.29	8.07
KRG97591	Soybean	plastid	15.94	8.03
KRH62368	Soybean	cytosol	18.84	7.95
KRH43206	Soybean	cytosol, plastid	15.58	7.85
KRH18895	Soybean	cytosol	19.93	7.82
KRH53085	Soybean	cytosol	19.57	7.74
KRH22291	Soybean	plastid	16.3	7.71
KRH21985	Soybean	cytosol	19.2	7.66
KRH27330	Soybean	cytosol	18.48	7.31
KRH26223	Soybean	nucleus	17.75	7.25
KRH27037	Soybean	nucleus	17.39	7.11
KRH55099	Soybean	nucleus	17.39	7.08

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100792585	MapMan:35.2	EMBL:ACUP02005360	ncoils:Coil	EnsemblPlantsGene:GLYMA_08G356700
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1KZC7	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	EnsemblPlants:KRH46794	ProteinID:KRH46794	ProteinID:KRH46794.1	PFAM:PF00515	PFAM:PF07719
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF356	MetaCyc:PWY-4361	MetaCyc:PWY-7174
SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_2
InterPro:TPR_repeat	UniParc:UPI0002337CC1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:46907338..46911300

Molecular Weight (calculated)

31277.9 Da

IEP (calculated)

4.557

GRAVY (calculated)

-1.051

Length

276 amino acids

Sequence
(BLAST)

001: MVVIEQEESE HRNANPSNDA SDGFETASDT DLASDGDDGG AGSPEEQNHI EQSHTEQNHT EQSHTEKHQQ QQQTEQEPEH DDPQSTESSE NNALINEEES
101: RQKALDQANE AKVEGNKLFV EGKYEEALLQ YELALQVASD MPSSVEIRSI CHSNRGVCFL KLEKYDNTIK ECTKALELNP VYVKALVRRG EAHEKLEHFD
201: KAIDDMKKIL EIDPSNDQAR KTIRRLETLA AEKREKMIAQ VKDMGNSFLR YLGLKENNFK AVKDPNTGSY SISFQR

Best Arabidopsis Sequence Match ( AT4G30480.2 )
(BLAST)

001: MVLIESSESE DEILIKNEPK PASSSSPQPT ETKQVDGDDS DGFETASERE ISDEEGEEDG TKNDAVTSQE EPQHSEKKEE QIELMSEGEA IVDDGSNKEK
101: ALAEANEAKA EGNKLFVNGL YEEALSKYAF ALELVQELPE SIELRSICYL NRGVCFLKLG KCEETIKECT KALELNPTYN KALVRRAEAH EKLEHFEDAV
201: TDLKKILELD PSNDQARKGI RRLEPLAAEK REKMKEEAIT KLKEMGNSIL GRFGMSVDNF KAVKDPNTGS YSLSFQN

Arabidopsis Description

TPR1AT4G30480 protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.