CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59356	Soybean	plastid	66.61	85.08
KRG97591	Soybean	plastid	63.5	63.5
KRH31282	Soybean	plastid	65.51	61.68
CDY08814	Canola	cytosol, plastid	47.26	61.67
Bra006046.1-P	Field mustard	cytosol	46.9	57.62
CDX78366	Canola	cytosol	46.9	57.62
CDX81156	Canola	cytosol	46.53	57.17
Bra024360.1-P	Field mustard	mitochondrion	55.29	51.71
Solyc04g055000.2.1	Tomato	cytosol	54.56	50.94
CDY68462	Canola	cytosol	54.74	50.93
CDX85779	Canola	cytosol	52.55	50.09
Bra009058.1-P	Field mustard	cytosol, mitochondrion	51.09	50.0
CDY40077	Canola	cytosol	52.37	49.91
CDX69861	Canola	cytosol, mitochondrion	50.91	49.82
AT5G65160.1	Thale cress	cytosol	53.83	49.75
PGSC0003DMT400053133	Potato	cytosol, plastid	54.2	49.58
AT5G10090.1	Thale cress	cytosol	53.65	49.49
CDY21634	Canola	cytosol, mitochondrion	50.55	49.46
Os02t0753500-01	Rice	cytosol	25.73	48.29
KRH08675	Soybean	cytosol, mitochondrion, plastid	28.83	47.02
HORVU4Hr1G024490.1	Barley	cytosol	26.46	45.31
VIT_00s0304g00060.t01	Wine grape	plastid	58.39	44.88
KRH15375	Soybean	cytosol	19.89	43.6
GSMUA_Achr11P...	Banana	plastid	46.35	43.42
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	43.25	40.51
KXG30730	Sorghum	cytosol, plastid	43.61	40.51
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	41.24	39.44
Zm00001d018088_P001	Maize	cytosol	42.34	39.32
GSMUA_Achr3P24690_001	Banana	cytosol	46.72	37.7
TraesCS6A01G301400.1	Wheat	mitochondrion	40.69	37.54
HORVU6Hr1G074660.5	Barley	plastid	41.06	36.06
KRH62368	Soybean	cytosol	42.34	35.47
KRH18895	Soybean	cytosol	42.88	33.43
KRH53085	Soybean	cytosol	42.52	33.38
KRH16702	Soybean	nucleus	41.97	33.14
KRH22291	Soybean	plastid	30.11	28.25
KRH55099	Soybean	nucleus	34.67	28.02
KRH21985	Soybean	cytosol	35.04	27.75
KRH26223	Soybean	nucleus	34.12	27.66
KRH27330	Soybean	cytosol	33.94	26.65
Bra028602.1-P	Field mustard	cytosol	52.37	26.35
KRH27037	Soybean	nucleus	30.84	25.04
KRG99844	Soybean	cytosol	8.21	16.79
KRH23391	Soybean	cytosol	5.47	16.76
KRH46794	Soybean	cytosol	7.85	15.58
KRH09945	Soybean	cytosol, endoplasmic reticulum	0.18	1.72

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100788206	MapMan:35.1	EMBL:ACUP02004848	EnsemblPlantsGene:GLYMA_08G137100	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1KT37	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
EnsemblPlants:KRH43206	ProteinID:KRH43206	ProteinID:KRH43206.1	PFAM:PF00515	PFAM:PF13432	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF360	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI0002338732	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:10474017..10476618

Molecular Weight (calculated)

60810.5 Da

IEP (calculated)

9.449

GRAVY (calculated)

-0.759

Length

548 amino acids

Sequence
(BLAST)

001: MGNNFPQGKC GCGGLIFWRP PPNNNNNNSN ANKFENLSNA SDTKKGQGGC EDITFSGTAS SNKPTNSSTR SGTKPNHVVN QNYQRNHPKV SPTEGYVSNG
101: RRVPKEAIGI SGELESMITD RQKGSSNLVR ASSSNVMMFN NLGNLRQGGN TNTYSQNPVA NGRYTNQTVE NVSKGNKEQP GSLCRVVSTR MNPEQLKIMG
201: NEDYKNGRFQ EALALYDAAI AIDPNKASYR SNKSAALTAL GRLLEAVFEC REAIQIEPRY QRAHYRLGNL NMRLGEMDKA LYHYKQAGPE IDPDENAKVK
301: KIQVHLNKCT EARRLGDWNK LIKETNNAIS SGADSAPQIF ALQAEAFLKL RRHQHAEEAM SKGSNFDVDH CTKFFGPICH ANTLVTQSRV HLAAGRFEDA
401: LVAIQRASRL DPNNNEMKKV MRKARAAAAA RSNGNELFMA SKFSEASVAY GEGLEHDPYN SVLLCNRAAC RSKLGQFEKA VEDCNASLSL RPSYSKARLR
501: RADCNAKLKR WEASIQDYEI LLKETPEDEE LTRALLEAKE HLIQQRGE

Best Arabidopsis Sequence Match ( AT5G65160.1 )
(BLAST)

001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS

Arabidopsis Description

TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.