Factsheet for GSMUA_Achr11P09960_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0753500-01	Rice	cytosol	30.43	60.96
CDY08814	Canola	cytosol, plastid	37.27	51.9
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	51.28	51.28
KXG30730	Sorghum	cytosol, plastid	50.94	50.51
CDX78366	Canola	cytosol	38.46	50.45
Bra006046.1-P	Field mustard	cytosol	38.29	50.22
CDX81156	Canola	cytosol	38.29	50.22
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	48.21	49.21
KRH59356	Soybean	plastid	36.07	49.18
Zm00001d018088_P001	Maize	cytosol	49.57	49.15
KRH15375	Soybean	cytosol	20.68	48.4
KRH08675	Soybean	cytosol, mitochondrion, plastid	26.84	46.73
KRH43206	Soybean	cytosol, plastid	43.42	46.35
PGSC0003DMT400022057	Potato	plastid	34.53	46.22
TraesCS6A01G301400.1	Wheat	mitochondrion	45.81	45.12
KRG97591	Soybean	plastid	41.54	44.34
KRH31282	Soybean	plastid	43.76	43.99
Solyc04g055000.2.1	Tomato	cytosol	43.93	43.78
HORVU6Hr1G074660.5	Barley	plastid	46.67	43.75
GSMUA_Achr3P24690_001	Banana	cytosol	49.91	43.0
AT5G65160.1	Thale cress	cytosol	43.25	42.66
AT5G10090.1	Thale cress	cytosol	43.25	42.59
Bra024360.1-P	Field mustard	mitochondrion	42.39	42.32
PGSC0003DMT400053133	Potato	cytosol, plastid	43.25	42.24
CDY40077	Canola	cytosol	41.37	42.09
CDX85779	Canola	cytosol	41.2	41.91
CDY68462	Canola	cytosol	42.05	41.77
CDX69861	Canola	cytosol, mitochondrion	39.83	41.61
Bra009058.1-P	Field mustard	cytosol, mitochondrion	39.83	41.61
CDY21634	Canola	cytosol, mitochondrion	39.66	41.43
Solyc04g073940.2.1	Tomato	cytosol	37.09	39.96
VIT_00s0304g00060.t01	Wine grape	plastid	48.55	39.83
PGSC0003DMT400045666	Potato	cytosol	37.09	39.82
Bra003657.1-P	Field mustard	cytosol	34.19	39.06
AT1G78120.1	Thale cress	cytosol	35.38	39.06
CDX87474	Canola	cytosol	35.04	38.97
Bra015628.1-P	Field mustard	cytosol	35.04	38.97
CDX79246	Canola	cytosol	34.02	38.87
CDX88420	Canola	cytosol	34.87	38.78
CDX68030	Canola	cytosol	33.5	38.51
VIT_18s0001g05380.t01	Wine grape	plastid	45.64	37.77
KRH62368	Soybean	cytosol	41.03	36.7
KRH53085	Soybean	cytosol	41.03	34.38
KRH18895	Soybean	cytosol	40.0	33.29
KRH16702	Soybean	nucleus	39.32	33.14
GSMUA_Achr7P24480_001	Banana	cytosol	34.19	30.82
GSMUA_Achr10P...	Banana	cytosol	34.53	30.28
GSMUA_Achr4P08560_001	Banana	cytosol	34.87	29.78
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	24.62	28.63
GSMUA_Achr3P25160_001	Banana	cytosol	34.19	28.09
GSMUA_AchrUn_...	Banana	cytosol	11.97	26.12
Bra028602.1-P	Field mustard	cytosol	40.85	21.95
GSMUA_Achr2P02050_001	Banana	cytosol	7.86	20.18

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr11G09960_001
EnsemblPlants:GSMUA_Achr11P09960_001	EnsemblPlants:GSMUA_Achr11T09960_001	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:M0RQX6
PFAM:PF00515	PFAM:PF13432	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF360
SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat
UniParc:UPI0002962CBC	SEG:seg	:	:	:	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_304.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr11G09960_001]

Coordinates

chr11:-:7791631..7793617

Molecular Weight (calculated)

63597.6 Da

IEP (calculated)

9.508

GRAVY (calculated)

-0.489

Length

585 amino acids

Sequence
(BLAST)

001: MSRQLSPSLC ELLSCANAGL PTPPRRSHRS PASEKMEVED EPRISGCGLF RRRRSRSTSS IPRIVPDAAS RLQDSSAAPR RRTGSDVTSI VPVLPPVPVV
101: KPRSPAPTAR AVANPRMPPP QTTARSNSGL MAELDGMLYD RHNASDGGHL VRASSGNVMV FGNLGNLRGN ANFKNPPTVA KNTKGSLGNP MRPSPIPASA
201: PAPAPAPELC RVLSRMLDPE ELKEMGNGEY KMGRFAEALA LYDRAIDMDP GKASYYSNKA AALTAMGRLL EAVVECKEAI RLDPAYHRAH HRLATLHLRL
301: GEAEKAIHHF KQSRNEASSG DMARAQALQS HLSRSNEARR LKDYITLLKE SQAAASSGAD FAPQVFARQA EALLKLNRHE EADSIMSAAP KFGMDEHTRF
401: FGTVAKAYVL MVQAQVDMAA GRFNDAVAAA KVAAQLDPGS REIGAVVRRT RAVAAARSRG NDLFRAAKFA EACVAYGDGL SQDSHNAVLL YNRATCRSKL
501: GHYEKAIEDC STALAVRPSY SKARLRRADC NAKLERWEAS VKDYGVLIQE IPGDEEVSRA LLEAQAKLKK QEEGEEEDMD DTDRC

Best Arabidopsis Sequence Match ( AT5G65160.1 )
(BLAST)

001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS

Arabidopsis Description

TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.