Factsheet for PGSC0003DMT400022057

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400045666	Potato	cytosol	60.18	48.26
Os02t0753500-01	Rice	cytosol	28.6	42.81
KRH08675	Soybean	cytosol, mitochondrion, plastid	31.58	41.07
KRH15375	Soybean	cytosol	23.11	40.4
HORVU4Hr1G024490.1	Barley	cytosol	29.06	39.69
PGSC0003DMT400054803	Potato	cytosol	24.49	36.39
GSMUA_Achr11P...	Banana	plastid	46.22	34.53
CDX88420	Canola	cytosol	40.73	33.84
Bra003657.1-P	Field mustard	cytosol	39.59	33.79
AT1G78120.1	Thale cress	cytosol	40.96	33.77
Bra015628.1-P	Field mustard	cytosol	40.5	33.65
CDX87474	Canola	cytosol	40.5	33.65
PGSC0003DMT400053133	Potato	cytosol, plastid	45.54	33.22
CDX68030	Canola	cytosol	38.67	33.2
CDX79246	Canola	cytosol	38.67	33.01
Zm00001d052221_P002	Maize	cytosol, nucleus, plastid	43.48	32.48
VIT_18s0001g05380.t01	Wine grape	plastid	52.4	32.39
Zm00001d018088_P001	Maize	cytosol	42.56	31.53
KXG30730	Sorghum	cytosol, plastid	42.33	31.36
TraesCS6B01G330500.1	Wheat	mitochondrion, plastid	40.96	31.24
KRH62368	Soybean	cytosol	44.39	29.66
GSMUA_Achr3P24690_001	Banana	cytosol	45.77	29.46
TraesCS6A01G301400.1	Wheat	mitochondrion	39.36	28.96
PGSC0003DMT400054909	Potato	cytosol	27.0	28.64
HORVU6Hr1G074660.5	Barley	plastid	40.73	28.53
KRH53085	Soybean	cytosol	44.39	27.79
KRH18895	Soybean	cytosol	44.16	27.45
KRH16702	Soybean	nucleus	43.02	27.09
PGSC0003DMT400054902	Potato	cytosol	17.62	25.75
PGSC0003DMT400054911	Potato	cytosol	29.06	24.38
PGSC0003DMT400054796	Potato	cytosol, plastid	33.41	23.74
PGSC0003DMT400032362	Potato	cytosol	36.38	22.71
PGSC0003DMT400054904	Potato	cytosol	30.89	22.35
PGSC0003DMT400091014	Potato	nucleus	29.98	21.58
PGSC0003DMT400029173	Potato	cytosol	10.76	16.04

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	UniProt:M1AG33	PFAM:PF00515	PFAM:PF13174	PFAM:PF13176
PFAM:PF13414	EnsemblPlantsGene:PGSC0003DMG400008554	PGSC:PGSC0003DMG400008554	EnsemblPlants:PGSC0003DMT400022057	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR22904	PANTHER:PTHR22904:SF360	SMART:SM00028	SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000294DB43	SEG:seg	:	:

Description

Heat shock protein binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008554]

Coordinates

chr12:-:55273907..55276572

Molecular Weight (calculated)

49094.9 Da

IEP (calculated)

9.720

GRAVY (calculated)

-0.437

Length

437 amino acids

Sequence
(BLAST)

001: MTIFSHRKSK ANGTLNHSST GNVILLSHLG NLKLRGNQNS SSDKKAIQKK GKILIGNIAR QTSSTVKSHQ PGSSFRSSAN KLDPDVLKSL GNEQYRQGKL
101: EEALDLYNQA IAIDPRNASY YSNKAAALMS LGHVIEAVVA CIEAIRLYPS YHNAHYRLAR LYVRLGDAEK AIDHYKQSGR KVDKKDIAEA HDIKRQLLKC
201: TEAQKLRDYN ALLKETQNSI TLGVDSAPQI FAMRAEALIK LHRHEEAYTT IQKVPHIKTE LCACLFGSVK TVYLLITRAE AYATVGWFEE ATAAAQEATK
301: LDQSNEVIIT ILRRIEGLAS SRLKGNELFR ENKFSEASFE YTEGLGQEPY NSILLFNRAA CRFKLGQFEK ALEDCTAALV LRPSYTKARL RRADCNIKLG
401: RWKAAIQDCE MLIQENPEDE EVSRVFLKAK NRLQKTC

Best Arabidopsis Sequence Match ( AT5G65160.1 )
(BLAST)

001: MEENTAVAAA ERRSGCGLLS VMFGRRGLWS KKSTAVDNGS QKSTSTAATA TSNIQFTKSP GTELKKPRDD QKVSAEPIQN NKIQNNQNHN QRSVVPSKPS
101: SNQYPNNHQL GTYENHQRSS YNNNSNSVDP YRGGGGQRKV PREAIGLSGE LESMITDHQK AKGTNGLVRA SSSNIMLYGN LGNLNQTGPV TAGVNYGNNN
201: GYGVKRTTMG AATATTTKSQ DQSGSLCRAI STRMDPETLK IMGNEDYKNG NFAEALALYD AAIAIDPNKA AYRSNKSAAL TALGRILDAV FECREAIRIE
301: PHYHRAHHRL GNLYLRLGEV EKSIYHFKHS GPEADREDIA KAKTVQTHLN KCTEAKRLRD WNGLITETTN TISSGADAAP QVYALQAEAL LKTHRHQEAD
401: DALSRCPVFD IDASTRYYGP VGYAGFLVVR AQVHLASGRF DEAVEAIQRA GKLDGNNREV IMISRRAQAV TEARFKGNEL FKSGRFQEAC AAYGEGLDHD
501: PRNSVLLCNR AACRSKLGQF DKSIEDCTAA LSVRPGYGKA RLRRADCNAK IEKWELAVGD YEILKKESPE DEQVIRGLSE AQQQLMKRSG QDS

Arabidopsis Description

TPR14At5g65160 [Source:UniProtKB/TrEMBL;Acc:Q9FJQ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.