Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054902 | Potato | cytosol | 65.99 | 64.88 |
| PGSC0003DMT400054904 | Potato | cytosol | 97.62 | 47.52 |
| Solyc10g007240.1.1 | Tomato | cytosol | 89.46 | 44.28 |
| PGSC0003DMT400054909 | Potato | cytosol | 60.88 | 43.45 |
| PGSC0003DMT400054911 | Potato | cytosol | 67.35 | 38.0 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 28.23 | 37.39 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 76.19 | 36.42 |
| Os05t0210600-01 | Rice | cytosol | 49.32 | 36.16 |
| PGSC0003DMT400091014 | Potato | nucleus | 64.29 | 31.14 |
| CDY34224 | Canola | cytosol | 6.46 | 27.54 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 45.92 | 26.84 |
| PGSC0003DMT400032362 | Potato | cytosol | 63.61 | 26.71 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 61.22 | 25.97 |
| KRH21985 | Soybean | cytosol | 58.5 | 24.86 |
| KRH26223 | Soybean | nucleus | 57.14 | 24.85 |
| KRH55099 | Soybean | nucleus | 57.14 | 24.78 |
| GSMUA_Achr10P... | Banana | cytosol | 56.12 | 24.74 |
| KRH27330 | Soybean | cytosol | 58.16 | 24.5 |
| PGSC0003DMT400022057 | Potato | plastid | 36.39 | 24.49 |
| Bra038116.1-P | Field mustard | cytosol | 54.42 | 24.32 |
| Bra030946.1-P | Field mustard | cytosol, plastid | 55.1 | 24.18 |
| CDY02514 | Canola | cytosol, plastid | 55.1 | 24.18 |
| CDY25865 | Canola | cytosol | 54.08 | 24.16 |
| CDY25722 | Canola | cytosol, plastid | 54.76 | 24.14 |
| CDY45930 | Canola | cytosol | 54.08 | 24.13 |
| CDY40820 | Canola | mitochondrion | 22.79 | 23.84 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 51.02 | 23.11 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 53.4 | 22.92 |
| Os01t0218200-00 | Rice | plastid | 52.38 | 22.92 |
| AT1G53300.1 | Thale cress | cytosol | 54.42 | 22.89 |
| Zm00001d008930_P003 | Maize | cytosol | 52.38 | 22.81 |
| Zm00001d039362_P002 | Maize | cytosol | 51.7 | 22.69 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 51.02 | 22.52 |
| CDY34222 | Canola | cytosol | 23.47 | 22.4 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 50.68 | 22.17 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 50.68 | 22.17 |
| Os05t0587300-01 | Rice | cytosol | 41.84 | 22.16 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 50.68 | 22.14 |
| EES02247 | Sorghum | plastid | 51.36 | 22.08 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 50.0 | 21.78 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 52.38 | 21.63 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 50.68 | 21.35 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 50.34 | 21.33 |
| Zm00001d011352_P001 | Maize | cytosol | 48.98 | 21.15 |
| EES01073 | Sorghum | cytosol | 48.64 | 21.0 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 49.66 | 20.95 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 48.98 | 20.93 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 48.98 | 20.93 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 48.64 | 20.78 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 48.64 | 20.78 |
| Zm00001d044479_P001 | Maize | cytosol | 47.62 | 20.56 |
| Bra023795.1-P | Field mustard | cytosol | 6.12 | 20.45 |
| PGSC0003DMT400045666 | Potato | cytosol | 37.76 | 20.37 |
| AT3G14950.1 | Thale cress | cytosol | 49.66 | 20.0 |
| OQU78515 | Sorghum | cytosol | 47.62 | 20.0 |
| CDY32327 | Canola | cytosol | 49.32 | 19.89 |
| PGSC0003DMT400053133 | Potato | cytosol, plastid | 40.14 | 19.7 |
| CDY20095 | Canola | nucleus | 48.64 | 19.64 |
| CDY34223 | Canola | cytosol | 21.77 | 19.63 |
| CDX98517 | Canola | cytosol | 48.3 | 19.61 |
| CDX97619 | Canola | cytosol | 47.62 | 19.31 |
| Bra027292.1-P | Field mustard | cytosol | 47.62 | 19.07 |
| Bra021583.1-P | Field mustard | nucleus | 48.98 | 19.05 |
| Bra023793.1-P | Field mustard | cytosol | 26.53 | 18.93 |
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 20.41 | 18.4 |
| PGSC0003DMT400029173 | Potato | cytosol | 14.29 | 14.33 |
| Zm00001d009724_P009 | Maize | cytosol | 47.96 | 13.19 |
| GSMUA_AchrUn_... | Banana | cytosol | 7.82 | 8.58 |
| Zm00001d006366_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d033961_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400054803 | EnsemblPlantsGene:PGSC0003DMG400021269 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| PANTHER:PTHR22904 | PANTHER:PTHR22904:SF402 | PFAM:PF13181 | PFscan:PS50293 | PGSC:PGSC0003DMG400021269 | SMART:SM00028 |
| SUPFAM:SSF48452 | UniParc:UPI000295922B | UniProt:M1BWW3 | MapMan:35.1 | : | : |
Description
Small glutamine-rich tetratricopeptide repeat-containing protein A [Source:PGSC_GENE;Acc:PGSC0003DMG400021269]
Coordinates
chr10:-:2291296..2292732
Molecular Weight (calculated)
33407.1 Da
IEP (calculated)
6.856
GRAVY (calculated)
-0.289
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKRIPEAV KECEEAIRLA PTYVRAHQRL GSLLLILGQV ENARKYLFIL DQIPDEAELH KLETVENHIN KCSEARRLGD WTSVLKEAEA ATSRGAEASA
101: QLFACQAEAH LKLHQLTDAE LWMYKARMYE ASARAYKSKL FGMISEAYIF FVQAQIENTL GKFDNACAAI ERAAQVDLQS AEVIGLLKNM RLVGRARSLG
201: NELFKSGRYI EACSAYGEGL SRDSLNLILY CNRATCWYKL EQWEKSLDDC NHALLIQPHY TKALFQKAAS NVKLERWADA VRDYEILRQE LPND
101: QLFACQAEAH LKLHQLTDAE LWMYKARMYE ASARAYKSKL FGMISEAYIF FVQAQIENTL GKFDNACAAI ERAAQVDLQS AEVIGLLKNM RLVGRARSLG
201: NELFKSGRYI EACSAYGEGL SRDSLNLILY CNRATCWYKL EQWEKSLDDC NHALLIQPHY TKALFQKAAS NVKLERWADA VRDYEILRQE LPND
001: MSHYRRHSLE PSITSKFRDS LSFQRDDDVI NKPDFRELDF GSPLRPRGSS SAAATPAASG SSSSSSGSAS GKPAVTSQFA RRSHSGELSG LSQTSPVKPG
101: SVNRNLKPGH RRSASAGTPL IYSGLGFSPV NNNNNSSRGG GSGATSPNPG VLPTGNICPS GRILKTGMAT RASVRPETLC TGTANYGHGN IIRTGGKVSH
201: ATKAAAEMSD SEEVKKAGNV MYRKGNYAEA LALYDRAISL SPENPAYRSN RAAALAASGR LEEAVKECLE AVRCDPSYAR AHQRLASLYL RLGEAENARR
301: HLCVSGQCPD QADLQRLQTL EKHLRLCTEA RKIGDWRTVI SEIDAAIANG ADSSPQLVAC KAEAFLRLHQ IKDSDLCISS IPRLDHHHTQ PPEKLFGIVC
401: DAYVLCVQAQ VDMALGRFEN AIVKVERAMT IDHSNSPEVV SVLNNVKNVA KARTRGNELF SSGRYSEASV AYGDGLKLDA FNSVLYCNRA ACWFKLGMWE
501: KSVDDCNQAL RIQPSYTKAL LRRAASYGKL GRWEDAVRDY EVLRKELPGD SEVAESLQRA RNALSNKSEE PKYLGFNNEV EEVSTLDKFK TATSLPGISV
601: FHFKSSSNRQ SEAISPFVNT LCLRYPLVHF FKASHLFLCS IAQNGYRFWS NALTGFVCL
101: SVNRNLKPGH RRSASAGTPL IYSGLGFSPV NNNNNSSRGG GSGATSPNPG VLPTGNICPS GRILKTGMAT RASVRPETLC TGTANYGHGN IIRTGGKVSH
201: ATKAAAEMSD SEEVKKAGNV MYRKGNYAEA LALYDRAISL SPENPAYRSN RAAALAASGR LEEAVKECLE AVRCDPSYAR AHQRLASLYL RLGEAENARR
301: HLCVSGQCPD QADLQRLQTL EKHLRLCTEA RKIGDWRTVI SEIDAAIANG ADSSPQLVAC KAEAFLRLHQ IKDSDLCISS IPRLDHHHTQ PPEKLFGIVC
401: DAYVLCVQAQ VDMALGRFEN AIVKVERAMT IDHSNSPEVV SVLNNVKNVA KARTRGNELF SSGRYSEASV AYGDGLKLDA FNSVLYCNRA ACWFKLGMWE
501: KSVDDCNQAL RIQPSYTKAL LRRAASYGKL GRWEDAVRDY EVLRKELPGD SEVAESLQRA RNALSNKSEE PKYLGFNNEV EEVSTLDKFK TATSLPGISV
601: FHFKSSSNRQ SEAISPFVNT LCLRYPLVHF FKASHLFLCS IAQNGYRFWS NALTGFVCL
Arabidopsis Description
TTL4TTL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.