CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02514	Canola	cytosol, plastid	96.25	95.82
CDY25865	Canola	cytosol	88.61	89.82
CDY45930	Canola	cytosol	88.01	89.07
AT1G53300.1	Thale cress	cytosol	87.11	83.12
KRH21985	Soybean	cytosol	64.92	62.57
KRH27330	Soybean	cytosol	63.87	61.03
KRH26223	Soybean	nucleus	61.02	60.21
KRH55099	Soybean	nucleus	61.02	60.03
VIT_19s0014g01470.t01	Wine grape	cytosol	61.77	59.45
PGSC0003DMT400032362	Potato	cytosol	59.52	56.71
Solyc07g062580.2.1	Tomato	cytosol	59.52	56.63
GSMUA_Achr10P...	Banana	cytosol	55.02	55.02
PGSC0003DMT400054803	Potato	cytosol	24.14	54.76
GSMUA_Achr4P08560_001	Banana	cytosol	54.27	52.85
GSMUA_Achr7P24480_001	Banana	cytosol	50.82	52.23
Os01t0218200-00	Rice	plastid	52.62	52.23
CDY34224	Canola	cytosol	5.4	52.17
TraesCS3B01G162100.1	Wheat	cytosol	52.32	51.93
Zm00001d008930_P003	Maize	cytosol	52.17	51.56
Zm00001d039362_P002	Maize	cytosol	51.57	51.34
TraesCS3D01G144600.1	Wheat	cytosol	51.87	51.26
TraesCS3A01G143000.1	Wheat	cytosol	51.57	51.19
EES02247	Sorghum	plastid	52.47	51.17
HORVU1Hr1G093390.2	Barley	cytosol	51.42	50.97
CDY32327	Canola	cytosol	55.62	50.89
CDY20095	Canola	nucleus	55.32	50.69
CDX98517	Canola	cytosol	54.87	50.55
EES01073	Sorghum	cytosol	51.57	50.51
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	38.08	50.5
CDX97619	Canola	cytosol	54.72	50.34
GSMUA_Achr3P25160_001	Banana	cytosol	53.67	50.28
Zm00001d044479_P001	Maize	cytosol	51.27	50.22
TraesCS1B01G462300.1	Wheat	cytosol	52.17	50.14
Os05t0210600-01	Rice	cytosol	30.13	50.12
TraesCS1D01G437100.1	Wheat	nucleus	52.17	49.86
TraesCS1A01G427400.1	Wheat	cytosol	51.87	49.64
CDY61202	Canola	cytosol	49.92	49.63
CDY42827	Canola	cytosol	49.78	49.48
TraesCS3A01G221800.1	Wheat	cytosol	50.97	49.42
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	50.82	49.27
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	50.67	49.13
CDY49237	Canola	cytosol	49.03	49.03
OQU78515	Sorghum	cytosol	51.27	48.86
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	50.37	48.84
Zm00001d011352_P001	Maize	cytosol	49.78	48.75
CDY51514	Canola	cytosol	48.88	48.73
CDX71941	Canola	cytosol	49.03	48.52
HORVU3Hr1G027650.2	Barley	mitochondrion	48.43	48.5
PGSC0003DMT400054902	Potato	cytosol	21.59	48.16
CDY55390	Canola	cytosol	48.13	47.98
PGSC0003DMT400054904	Potato	cytosol	42.28	46.69
PGSC0003DMT400054796	Potato	cytosol, plastid	42.73	46.34
Solyc10g007240.1.1	Tomato	cytosol	40.63	45.62
Zm00001d004494_P001	Maize	cytosol, mitochondrion	15.14	45.5
Solyc10g007230.1.1	Tomato	cytosol	40.63	45.47
Os05t0587300-01	Rice	cytosol	37.63	45.23
CDY34222	Canola	cytosol	20.69	44.81
PGSC0003DMT400054909	Potato	cytosol	27.29	44.17
PGSC0003DMT400054911	Potato	cytosol	34.48	44.15
CDY40820	Canola	mitochondrion	18.59	44.13
GSMUA_AchrUn_...	Banana	cytosol	17.69	44.03
Solyc10g007420.2.1	Tomato	cytosol	26.54	41.65
Solyc10g007250.1.1	Tomato	cytosol	17.24	41.22
Solyc10g007220.1.1	Tomato	cytosol	30.88	40.79
Solyc10g007430.1.1	Tomato	cytosol, plastid	22.94	40.48
CDY08814	Canola	cytosol, plastid	25.49	40.48
PGSC0003DMT400091014	Potato	nucleus	35.68	39.21
CDY34223	Canola	cytosol	17.84	36.5
CDX78366	Canola	cytosol	23.69	35.43
CDX81156	Canola	cytosol	23.54	35.2
CDY00576	Canola	cytosol	6.15	35.04
CDX87474	Canola	cytosol	25.19	31.94
CDX68030	Canola	cytosol	24.29	31.83
CDY40077	Canola	cytosol	27.44	31.83
CDX69861	Canola	cytosol, mitochondrion	26.69	31.79
CDY21634	Canola	cytosol, mitochondrion	26.54	31.61
CDX88420	Canola	cytosol	24.89	31.56
CDX85779	Canola	cytosol	27.14	31.48
CDX79246	Canola	cytosol	24.14	31.45
Zm00001d009724_P009	Maize	cytosol	49.92	31.15
CDY68462	Canola	cytosol	26.99	30.56
CDY39682	Canola	cytosol	10.04	24.19
CDY65185	Canola	cytosol	9.6	23.1
CDX72245	Canola	cytosol	9.0	22.81
CDX68662	Canola	endoplasmic reticulum, mitochondrion	2.7	17.65
CDY28190	Canola	extracellular	2.55	16.67
CDX85780	Canola	nucleus	10.04	14.13
Zm00001d006366_P001	Maize	cytosol	0.45	1.29
Zm00001d033961_P001	Maize	cytosol	0.45	1.29

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.5	Gene3D:3.40.30.10	GO:A0A078GKN7	UniProt:A0A078GKN7	EnsemblPlants:CDY25722
ProteinID:CDY25722	ProteinID:CDY25722.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	EnsemblPlantsGene:GSBRNA2T00033073001
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR013766	InterPro:IPR019734	PFAM:PF00085	PFAM:PF13181
PFAM:PF13432	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF402	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF52833	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI0004EE1E96	SEG:seg	:	:	:

Description

BnaC03g69530DBnaC03g69530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKN7]

Coordinates

chrLK032179:-:290840..293995

Molecular Weight (calculated)

72262.1 Da

IEP (calculated)

9.519

GRAVY (calculated)

-0.368

Length

667 amino acids

Sequence
(BLAST)

001: MSPSGKPVPP RDSLTSEINK PDFRELDLGS PVSPLRSQPR GLTTTTTTTS SSSSSSSGSV TRHPPVIGRS GSVRVSQSGS SSGNLRTSQA RSDSVTSNSQ
101: PLVSSSTQSS ATSPATAANV LPTGNICPSG KIQLTGMTQS RSRSDVLGSG TGTYGHGSIM RGGGGSGVSP AKPVAPVTVG GSIRSSPAAM LGSDAEEVKR
201: VGNEMYRKGL FGEALRLYDR AIALSPANAA YRSNRAAALT GLGRVGEAVK ECEEALRLDP NYGRAHQRLA SLLIRLGQAD SARKHLCFLG KPSDPMELQK
301: LEAVEKHMSK CADARRLGDW KAALMEVDAA IVSGADFSPQ LVMCKVEALL KLHRLDAAHS KLLEVPKVEP FPASCSQSRF SGMACEAYTH FVKAQVEMAL
401: GRFENAVMAA EKASKLDPRS NEVAMLHNTV TLVARARVRG NDLYKSERYT EASSAYAEGL RLDPCNAILY CNRAACWFKL GMWERSIEDC NHALRFQPRY
501: TKPLLRRAAS NSKMERWAAA VSDYKALRKE LPHDKEVAES LFHAQVALKK SRGEEVLNME FGGEVEEVYS REQFKAAMNL PGVSVIHFST ASDHQCKQLS
601: PFVDSLCTRY PSIHFLKVDI DKCQSIGNAE NVRVVPTVKI YKNGTRVKEI VCPNKEVLEY SVRHYSS

Best Arabidopsis Sequence Match ( AT1G53300.1 )
(BLAST)

001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG

Arabidopsis Description

TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.