Factsheet for Solyc10g007420.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054909	Potato	cytosol	52.94	54.61
Solyc10g007230.1.1	Tomato	cytosol	75.76	54.03
PGSC0003DMT400054796	Potato	cytosol, plastid	74.12	51.22
Solyc10g007220.1.1	Tomato	cytosol	54.59	45.94
Solyc10g007240.1.1	Tomato	cytosol	63.06	45.12
Solyc10g007430.1.1	Tomato	cytosol, plastid	33.65	37.83
CDY34224	Canola	cytosol	6.12	37.68
Bra023795.1-P	Field mustard	cytosol	7.29	35.23
Solyc10g007250.1.1	Tomato	cytosol	22.82	34.77
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	40.71	34.39
Zm00001d004494_P001	Maize	cytosol, mitochondrion	17.65	33.78
Os05t0210600-01	Rice	cytosol	28.94	30.67
Solyc07g062580.2.1	Tomato	cytosol	49.41	29.96
VIT_19s0014g01470.t01	Wine grape	cytosol	47.76	29.29
KRH27330	Soybean	cytosol	47.76	29.08
KRH26223	Soybean	nucleus	45.65	28.7
KRH21985	Soybean	cytosol	46.59	28.61
KRH55099	Soybean	nucleus	45.18	28.32
Bra038116.1-P	Field mustard	cytosol	42.12	27.2
CDY25865	Canola	cytosol	41.88	27.05
CDY45930	Canola	cytosol	41.65	26.86
CDY02514	Canola	cytosol, plastid	42.12	26.72
Bra030946.1-P	Field mustard	cytosol, plastid	42.12	26.72
CDY25722	Canola	cytosol, plastid	41.65	26.54
GSMUA_Achr10P...	Banana	cytosol	41.41	26.39
GSMUA_Achr7P24480_001	Banana	cytosol	40.24	26.35
GSMUA_Achr4P08560_001	Banana	cytosol	42.35	26.28
AT1G53300.1	Thale cress	cytosol	42.82	26.04
EES01073	Sorghum	cytosol	40.71	25.4
Zm00001d044479_P001	Maize	cytosol	40.24	25.11
Zm00001d039362_P002	Maize	cytosol	39.06	24.78
HORVU3Hr1G027650.2	Barley	mitochondrion	38.59	24.62
Zm00001d011352_P001	Maize	cytosol	39.29	24.52
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	39.53	24.42
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	39.53	24.42
Os01t0218200-00	Rice	plastid	38.59	24.4
HORVU1Hr1G093390.2	Barley	cytosol	38.59	24.37
TraesCS1B01G462300.1	Wheat	cytosol	39.76	24.35
Zm00001d008930_P003	Maize	cytosol	38.59	24.3
TraesCS3A01G221800.1	Wheat	cytosol	39.29	24.27
TraesCS1D01G437100.1	Wheat	nucleus	39.76	24.21
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	39.06	24.13
TraesCS3B01G162100.1	Wheat	cytosol	38.12	24.11
TraesCS3A01G143000.1	Wheat	cytosol	37.88	23.96
TraesCS1A01G427400.1	Wheat	cytosol	39.06	23.82
TraesCS3D01G144600.1	Wheat	cytosol	37.65	23.7
EES02247	Sorghum	plastid	38.12	23.68
OQU78515	Sorghum	cytosol	38.59	23.43
GSMUA_Achr3P25160_001	Banana	cytosol	38.82	23.17
AT3G14950.1	Thale cress	cytosol	39.29	22.88
CDY20095	Canola	nucleus	39.06	22.8
CDY40820	Canola	mitochondrion	15.06	22.78
CDY32327	Canola	cytosol	39.06	22.77
CDY34222	Canola	cytosol	16.47	22.73
Bra021583.1-P	Field mustard	nucleus	39.06	21.96
Bra027292.1-P	Field mustard	cytosol	37.41	21.66
CDX98517	Canola	cytosol	36.71	21.55
CDX97619	Canola	cytosol	36.47	21.38
Os05t0587300-01	Rice	cytosol	25.88	19.82
Solyc04g073940.2.1	Tomato	cytosol	24.94	19.52
CDY34223	Canola	cytosol	14.82	19.33
Bra023793.1-P	Field mustard	cytosol	18.35	18.93
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	14.12	18.4
Solyc04g055000.2.1	Tomato	cytosol	25.18	18.23
Solyc07g006180.2.1	Tomato	cytosol	11.06	18.01
Zm00001d009724_P009	Maize	cytosol	38.12	15.15
GSMUA_AchrUn_...	Banana	cytosol	1.18	1.87
Zm00001d006366_P001	Maize	cytosol	0.47	0.86
Zm00001d033961_P001	Maize	cytosol	0.47	0.86

Protein Annotations

Gene3D:1.25.40.10	Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR013766	InterPro:IPR019734	UniProt:K4CXS1	PFAM:PF00085
PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF402	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF52833
EnsemblPlantsGene:Solyc10g007420.2	EnsemblPlants:Solyc10g007420.2.1	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI000276B3AD	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:1785948..1788700

Molecular Weight (calculated)

47961.5 Da

IEP (calculated)

8.855

GRAVY (calculated)

-0.297

Length

425 amino acids

Sequence
(BLAST)

001: MIPEIYGYGS IMPFGAMQRT NAEELNTQAN EIKGLGQVEN ARKGQKPDQA KLQAMEEHIS KCADARRSKN WVTMLIIAAE ATTSEADASP KLFACQAEAH
101: LKLYKLKDAE LWIRKARTYE LSATECRSKI FGMLSEAYIL FVQAQIDSCL GKFDDAFIAI ERAAQIDIQS AEVTGKLKNM RLVDKARTHG NEHFNSKRYR
201: QACSVYGEGL FLDFSNSVLY HNRANCWFKL GEWEESRADS IRALVIRPQY TKALYRKAAS SIKLERWADA VSDYEFLRQQ LPSNKVVAEN LSYARAELRK
301: SRRKGNFMVK LVSDLDKFRA AIASGPSVVY FDELSNPEST WMSYIMDTLN AEYPSVTFLE VDVKQSPAIA TAEKIKVAPR IKLYNNGSRV AETVMLTPDS
401: LELLIKNTLV FPPSWFGVTS VMTGI

Best Arabidopsis Sequence Match ( AT1G53300.1 )
(BLAST)

001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG

Arabidopsis Description

TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.