Factsheet for Solyc10g007230.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054796	Potato	cytosol, plastid	85.91	83.25
PGSC0003DMT400054909	Potato	cytosol	54.03	78.16
Solyc10g007420.2.1	Tomato	cytosol	54.03	75.76
Solyc10g007240.1.1	Tomato	cytosol	69.13	69.36
Solyc10g007220.1.1	Tomato	cytosol	51.17	60.4
Solyc10g007250.1.1	Tomato	cytosol	21.64	46.24
Solyc07g062580.2.1	Tomato	cytosol	53.69	45.65
Solyc10g007430.1.1	Tomato	cytosol, plastid	27.18	42.86
VIT_19s0014g01470.t01	Wine grape	cytosol	49.5	42.57
KRH21985	Soybean	cytosol	49.33	42.49
KRH26223	Soybean	nucleus	48.15	42.46
KRH27330	Soybean	cytosol	49.5	42.26
KRH55099	Soybean	nucleus	47.82	42.04
CDY34224	Canola	cytosol	4.87	42.03
Os05t0210600-01	Rice	cytosol	28.19	41.9
Bra038116.1-P	Field mustard	cytosol	45.81	41.49
CDY25865	Canola	cytosol	45.64	41.34
CDY45930	Canola	cytosol	45.13	40.82
CDY02514	Canola	cytosol, plastid	45.81	40.75
Bra030946.1-P	Field mustard	cytosol, plastid	45.81	40.75
CDY25722	Canola	cytosol, plastid	45.47	40.63
GSMUA_Achr7P24480_001	Banana	cytosol	43.79	40.22
GSMUA_Achr10P...	Banana	cytosol	44.8	40.03
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	33.22	39.36
AT1G53300.1	Thale cress	cytosol	45.81	39.06
GSMUA_Achr4P08560_001	Banana	cytosol	44.8	38.98
Bra023795.1-P	Field mustard	cytosol	5.7	38.64
Zm00001d004494_P001	Maize	cytosol, mitochondrion	13.93	37.39
Os01t0218200-00	Rice	plastid	41.61	36.9
Zm00001d039362_P002	Maize	cytosol	41.44	36.87
GSMUA_Achr3P25160_001	Banana	cytosol	43.62	36.52
EES01073	Sorghum	cytosol	41.44	36.27
Zm00001d008930_P003	Maize	cytosol	40.94	36.15
Zm00001d044479_P001	Maize	cytosol	41.28	36.12
HORVU1Hr1G093390.2	Barley	cytosol	40.77	36.11
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	41.61	36.05
TraesCS3B01G162100.1	Wheat	cytosol	40.6	36.01
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	41.44	35.9
TraesCS3A01G221800.1	Wheat	cytosol	41.44	35.9
TraesCS1B01G462300.1	Wheat	cytosol	41.78	35.88
TraesCS3A01G143000.1	Wheat	cytosol	40.44	35.86
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	41.28	35.76
TraesCS1D01G437100.1	Wheat	nucleus	41.78	35.67
EES02247	Sorghum	plastid	40.94	35.67
TraesCS1A01G427400.1	Wheat	cytosol	41.44	35.44
TraesCS3D01G144600.1	Wheat	cytosol	40.1	35.41
AT3G14950.1	Thale cress	cytosol	43.12	35.21
Zm00001d011352_P001	Maize	cytosol	40.1	35.1
CDY32327	Canola	cytosol	42.79	34.98
CDY20095	Canola	nucleus	42.45	34.75
HORVU3Hr1G027650.2	Barley	mitochondrion	38.76	34.68
OQU78515	Sorghum	cytosol	40.6	34.57
CDY40820	Canola	mitochondrion	16.11	34.16
Os05t0587300-01	Rice	cytosol	31.38	33.69
Bra021583.1-P	Field mustard	nucleus	42.45	33.47
CDY34222	Canola	cytosol	17.28	33.44
CDX98517	Canola	cytosol	40.6	33.43
Bra027292.1-P	Field mustard	cytosol	41.11	33.38
CDX97619	Canola	cytosol	40.27	33.1
CDY34223	Canola	cytosol	16.61	30.37
GSMUA_AchrUn_...	Banana	cytosol	13.59	30.22
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	16.11	29.45
Bra023793.1-P	Field mustard	cytosol	20.13	29.13
Solyc04g073940.2.1	Tomato	cytosol	25.5	27.99
Solyc04g055000.2.1	Tomato	cytosol	26.85	27.26
Zm00001d009724_P009	Maize	cytosol	39.77	22.17
Solyc07g006180.2.1	Tomato	cytosol	9.06	20.69
Zm00001d006366_P001	Maize	cytosol	0.17	0.43
Zm00001d033961_P001	Maize	cytosol	0.17	0.43

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.5	Gene3D:3.40.30.10	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0019725
GO:GO:0045454	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR013766	InterPro:IPR019734	UniProt:K4CXQ3
PFAM:PF00085	PFAM:PF00515	PFAM:PF13432	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904
PANTHER:PTHR22904:SF402	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc10g007230.1	EnsemblPlants:Solyc10g007230.1.1
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI000276B1BF	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr10:+:1650247..1653367

Molecular Weight (calculated)

65789.4 Da

IEP (calculated)

8.549

GRAVY (calculated)

-0.378

Length

596 amino acids

Sequence
(BLAST)

001: MWGSKKKSDS EKGSSSSADQ MRFEEGDPRI LKLGSPVSTL RSGMSSSNTT STSGSSASGS GRNVSSSSSS GSNRIKIVPP GNICPSGNVI TGMRCKPERT
101: VLNDSKMIPG IYGYGSIMPG GAMQRTRCAE ELNTQANEIY RKGNFAEALS LYDKAIAISP RDGRFHCNRA AALMGLKRII EAVKECEEAI RLSPAYVRAH
201: QRLGTLLLCL GQVENAREYL HCLDQKPDQA TLEKLQAVEE HIGKCAVARR SEDWTTMLKK AVAATTSGAD ASPQLFACQA EAHLKLHQLK DAELWIYKAR
301: TYELSATECR SKIFGMLSEA YIFFVQAQID SSLGKFDDAC TAIERAARID LQSAEVTGKL KNMRLVGKAR THGNEHFNAK RYAQACTAYG EGILLDSSNS
401: VLYYNRANCW FKLGEWEKSL DDCTHALLIR PQYTKALFRK AASNIKLERW ADAVRDYEIL RQELPSNEEV AENLSHARAE LRKSRREGNG KVELVSDLDK
501: FRAAIASGAS VVCFDELSKP QGTWMSSVMD NLSAKYRSVI FLKVDMEQSP AIATAEKVTV APTFKLYKDG NRQVDTVTAI PDFLDFLIKD TLLDPI

Best Arabidopsis Sequence Match ( AT2G42580.1 )
(BLAST)

001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L

Arabidopsis Description

TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.