Factsheet for Bra021583.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20095	Canola	nucleus	92.46	96.02
Bra027292.1-P	Field mustard	cytosol	74.47	76.7
AT3G14950.1	Thale cress	cytosol	64.29	66.58
Bra038116.1-P	Field mustard	cytosol	50.0	57.45
Bra023795.1-P	Field mustard	cytosol	6.48	55.68
Bra030946.1-P	Field mustard	cytosol, plastid	49.07	55.37
KRH21985	Soybean	cytosol	46.3	50.58
KRH27330	Soybean	cytosol	46.03	49.86
VIT_19s0014g01470.t01	Wine grape	cytosol	45.37	49.49
PGSC0003DMT400054803	Potato	cytosol	19.05	48.98
KRH26223	Soybean	nucleus	43.65	48.82
KRH55099	Soybean	nucleus	43.12	48.08
PGSC0003DMT400032362	Potato	cytosol	43.65	47.14
Solyc07g062580.2.1	Tomato	cytosol	43.52	46.93
GSMUA_Achr10P...	Banana	cytosol	40.08	45.43
GSMUA_Achr4P08560_001	Banana	cytosol	41.14	45.4
GSMUA_Achr7P24480_001	Banana	cytosol	38.76	45.15
PGSC0003DMT400054902	Potato	cytosol	17.72	44.82
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	29.76	44.73
PGSC0003DMT400054904	Potato	cytosol	35.19	44.04
Bra023793.1-P	Field mustard	cytosol	23.94	43.93
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	18.65	43.25
GSMUA_Achr3P25160_001	Banana	cytosol	40.61	43.12
Os01t0218200-00	Rice	plastid	38.23	43.01
TraesCS3B01G162100.1	Wheat	cytosol	38.1	42.86
Zm00001d039362_P002	Maize	cytosol	37.83	42.69
Zm00001d008930_P003	Maize	cytosol	38.1	42.67
Solyc10g007230.1.1	Tomato	cytosol	33.47	42.45
TraesCS3D01G144600.1	Wheat	cytosol	37.83	42.37
TraesCS3A01G143000.1	Wheat	cytosol	37.57	42.26
Os05t0210600-01	Rice	cytosol	22.35	42.14
PGSC0003DMT400054796	Potato	cytosol, plastid	34.26	42.11
EES02247	Sorghum	plastid	38.1	42.11
HORVU3Hr1G027650.2	Barley	mitochondrion	36.77	41.74
Solyc10g007240.1.1	Tomato	cytosol	32.67	41.58
Zm00001d044479_P001	Maize	cytosol	37.43	41.56
Bra000267.1-P	Field mustard	cytosol	36.77	41.37
EES01073	Sorghum	cytosol	37.17	41.26
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	37.43	41.13
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	37.43	41.13
Bra004709.1-P	Field mustard	cytosol	35.71	41.1
TraesCS3A01G221800.1	Wheat	cytosol	37.3	40.99
Bra007405.1-P	Field mustard	cytosol	36.38	40.86
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	37.17	40.84
PGSC0003DMT400054911	Potato	cytosol	28.04	40.69
TraesCS1B01G462300.1	Wheat	cytosol	37.17	40.49
TraesCS1A01G427400.1	Wheat	cytosol	37.3	40.46
HORVU1Hr1G093390.2	Barley	cytosol	35.85	40.27
TraesCS1D01G437100.1	Wheat	nucleus	37.17	40.26
Zm00001d011352_P001	Maize	cytosol	36.24	40.23
Zm00001d004494_P001	Maize	cytosol, mitochondrion	11.64	39.64
OQU78515	Sorghum	cytosol	36.51	39.43
PGSC0003DMT400054909	Potato	cytosol	21.3	39.08
Solyc10g007420.2.1	Tomato	cytosol	21.96	39.06
Solyc10g007220.1.1	Tomato	cytosol	25.66	38.42
Solyc10g007250.1.1	Tomato	cytosol	13.76	37.28
Os05t0587300-01	Rice	cytosol	26.98	36.76
PGSC0003DMT400091014	Potato	nucleus	29.5	36.74
GSMUA_AchrUn_...	Banana	cytosol	12.96	36.57
Solyc10g007430.1.1	Tomato	cytosol, plastid	17.72	35.45
Bra006046.1-P	Field mustard	cytosol	19.18	32.51
Bra015628.1-P	Field mustard	cytosol	21.56	30.99
Bra003657.1-P	Field mustard	cytosol	20.63	30.47
Bra009058.1-P	Field mustard	cytosol, mitochondrion	20.9	28.21
Bra024360.1-P	Field mustard	mitochondrion	21.3	27.47
Zm00001d009724_P009	Maize	cytosol	35.85	25.35
Bra032136.1-P	Field mustard	cytosol	7.67	20.94
Bra028602.1-P	Field mustard	cytosol	21.03	14.6
Bra011197.1-P	Field mustard	cytosol	1.46	13.41
Zm00001d006366_P001	Maize	cytosol	0.53	1.72
Zm00001d033961_P001	Maize	cytosol	0.53	1.72

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.5	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra021583	EnsemblPlants:Bra021583.1	EnsemblPlants:Bra021583.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR013766
InterPro:IPR019734	UniProt:M4DYI7	PFAM:PF00085	PFAM:PF13181	PFAM:PF13414	PFAM:PF13431
PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF402	SMART:SM00028	SUPFAM:SSF48452
SUPFAM:SSF52833	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain
UniParc:UPI0002544189	SEG:seg	:	:	:	:

Description

AT1G53300 (E=2e-180) TTL1 | TTL1 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 1); binding

Coordinates

chrA01:+:24351962..24354686

Molecular Weight (calculated)

82802.9 Da

IEP (calculated)

9.842

GRAVY (calculated)

-0.341

Length

756 amino acids

Sequence
(BLAST)

001: MLKHIKHVLE HDTVADKLRR RSLHYENNKQ DTSSVNADRG SPITPLRTPP SGLTSAATTT STSSFNSSSS ESVTGRGGHA PVTTKTDSRR PNPSAAKCKP
101: STSSAVQSAT HNPAAAQLSC TPAAQSYKPA ASSAAKSLKS TVPAAAHRRS SSTSAGVKVR SSSNIPKTAS GNPRACRSSL VSDSALTTVK QPGKSSTTPP
201: QPVKIVPAGN IIPSGKVHIT GMTQGVTKSM VLGPGSKSYG YGSVVRGNSY SPTSASSSGT LVISRGGGSE VDTSWQRVMN SPNPEEAKRL GNEMFKKGSF
301: SLALKFYDRA LELSPTNAKY HSNRAAALSG LGRIAEAVIE CERAIQLDPN LARAHHRLAT LLIRLGQVDS AGKHLFCVGE PSDPMVVKVL QQVDRHLNKC
401: ADARRRGLWN VVLTQASAAM ESGADMSPQL VMCKVEALLK LQRLDEAQTI LASSPNMELL PASFLKIRFF DMISQAYIYF VKSQIELALG RFENAVTFTE
501: KASEIDPRNS EIKALYRNVK LIVRARDRGN ELYESERYTE AIAAYTEGLK FDQYNATLLG HRAECFFKVG YWESSIEDCN HALLILPSYT KIRRQRAASY
601: SKLERWDEAV RDYETLRKEL SYDREIAESL FHAQVALKRS RGGVVLNMEF GCEVEEISTL EEFKAALTRP GVSVVLFMKV SDRQCKEMSV FMDALCIRYP
701: SLHFLKVDIE RCPGVCDAEK VRIVPTFKIY KLGTRMKEIV CPSKEALESS VRHYSL

Best Arabidopsis Sequence Match ( AT3G14950.1 )
(BLAST)

001: MSKLKKPILE SNCVADKLCD SLNMEDNNND KPDTINVDLG SPITPLQTQP SGLSSSTSSF SSSSSGSVTG HAGHTPPVTR KPDSVQPVPS ASKSKSSNLS
101: SAAKSSKSST TPSSAAQFGG SYSPARAQSR ASSQVGAKTG NIIRPSSNSA SVTTKPSGNK SSVSSKQSLK ILPAGNLVPS GKVQITGMTQ EKPRSMVLGP
201: GAKSYGYGSI IRGNNLSPVK PTMMSDSSSV LPLTLSNNST GGPDAYTSWK IAIYGSNPEE VKRFGNEMFR KGCFAEALKL YDRAIELSPS NATYHSNRAA
301: ALSSLGQIGE AVNECEIAIK LDPNFARAHH RLASLLLRLG YVDNAGIHLY SVEEPLDPTV VKMLQQVDKH LNKCTYARRR GEWSIVLTEV SAAIASGADS
401: SPQLAMCKAE ALLKLLRLDD AQRVLECVPK VEPFPASFSH TRFFDMIAEA YTSFVKSQME LALGRFENAV VTAEKASKID PQNNEVEILY KNVRLITRAR
501: DRGNDLYELE RYTEARSAYA EGLKYDPSNA TLLCYRADCF FKVGMWESSI EDCNHALLIL PSYTKPRLQR AALYTKLERW AEAVSDYEIL RKELPYDKEI
601: AESLFHAQVA LKKSRGEVVL NMEFGGEVEE ISSLEELKAA LTRPGVSVVH FFRASDPQCK EISTFVDALC VRYPSLHFLK VEIVKCPEVG NAERVRVVPT
701: FKIYKLGIRM KEIVCPSKEA LEKTVRHYGL

Arabidopsis Description

TTL2TPR repeat-containing thioredoxin TTL2 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.