Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY49237 | Canola | cytosol | 96.58 | 97.45 |
AT3G58620.1 | Thale cress | cytosol | 84.7 | 83.58 |
Bra000267.1-P | Field mustard | cytosol | 73.25 | 73.36 |
Bra004709.1-P | Field mustard | cytosol | 70.13 | 71.84 |
VIT_18s0001g09830.t01 | Wine grape | cytosol | 22.59 | 57.58 |
VIT_12s0028g02240.t01 | Wine grape | cytosol | 59.58 | 56.48 |
KRH22291 | Soybean | plastid | 48.44 | 55.82 |
GSMUA_Achr10P... | Banana | cytosol | 51.56 | 52.02 |
GSMUA_Achr7P24480_001 | Banana | cytosol | 48.44 | 50.23 |
Bra038116.1-P | Field mustard | cytosol | 48.29 | 49.39 |
Os01t0218200-00 | Rice | plastid | 49.03 | 49.11 |
GSMUA_Achr4P08560_001 | Banana | cytosol | 49.78 | 48.91 |
Bra030946.1-P | Field mustard | cytosol, plastid | 48.29 | 48.51 |
Zm00001d039362_P002 | Maize | cytosol | 48.14 | 48.36 |
EES02247 | Sorghum | plastid | 48.89 | 48.1 |
TraesCS3B01G162100.1 | Wheat | cytosol | 47.99 | 48.07 |
KRH27037 | Soybean | nucleus | 48.14 | 48.0 |
GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 35.81 | 47.91 |
TraesCS3D01G144600.1 | Wheat | cytosol | 47.7 | 47.56 |
EES01073 | Sorghum | cytosol | 47.99 | 47.43 |
Zm00001d008930_P003 | Maize | cytosol | 47.55 | 47.41 |
TraesCS3A01G143000.1 | Wheat | cytosol | 47.25 | 47.32 |
Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 15.45 | 46.85 |
Os05t0210600-01 | Rice | cytosol | 27.79 | 46.63 |
HORVU1Hr1G093390.2 | Barley | cytosol | 46.36 | 46.36 |
Zm00001d044479_P001 | Maize | cytosol | 46.81 | 46.26 |
GSMUA_Achr3P25160_001 | Banana | cytosol | 48.74 | 46.07 |
Zm00001d011352_P001 | Maize | cytosol | 46.36 | 45.81 |
TraesCS3A01G221800.1 | Wheat | cytosol | 46.66 | 45.64 |
TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 46.66 | 45.64 |
TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 46.51 | 45.49 |
TraesCS1B01G462300.1 | Wheat | cytosol | 46.66 | 45.24 |
HORVU3Hr1G027650.2 | Barley | mitochondrion | 44.73 | 45.2 |
TraesCS1D01G437100.1 | Wheat | nucleus | 46.81 | 45.13 |
TraesCS1A01G427400.1 | Wheat | cytosol | 46.66 | 45.05 |
OQU78515 | Sorghum | cytosol | 46.66 | 44.86 |
HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 45.62 | 44.62 |
Os05t0587300-01 | Rice | cytosol | 36.55 | 44.32 |
GSMUA_AchrUn_... | Banana | cytosol | 16.49 | 41.42 |
Bra006046.1-P | Field mustard | cytosol | 26.15 | 39.46 |
Bra027292.1-P | Field mustard | cytosol | 40.42 | 37.06 |
Bra021583.1-P | Field mustard | nucleus | 40.86 | 36.38 |
Bra009058.1-P | Field mustard | cytosol, mitochondrion | 27.79 | 33.39 |
Bra003657.1-P | Field mustard | cytosol | 25.11 | 33.01 |
Bra023793.1-P | Field mustard | cytosol | 19.61 | 32.04 |
Bra015628.1-P | Field mustard | cytosol | 24.96 | 31.94 |
Bra024360.1-P | Field mustard | mitochondrion | 27.64 | 31.74 |
Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 15.01 | 30.98 |
Bra023795.1-P | Field mustard | cytosol | 3.86 | 29.55 |
Zm00001d009724_P009 | Maize | cytosol | 43.39 | 27.32 |
Bra032136.1-P | Field mustard | cytosol | 9.81 | 23.83 |
Bra028602.1-P | Field mustard | cytosol | 28.08 | 17.36 |
Bra011197.1-P | Field mustard | cytosol | 2.08 | 17.07 |
Zm00001d006366_P001 | Maize | cytosol | 0.3 | 0.86 |
Zm00001d033961_P001 | Maize | cytosol | 0.3 | 0.86 |
Protein Annotations
Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | EnsemblPlantsGene:Bra007405 | EnsemblPlants:Bra007405.1 | EnsemblPlants:Bra007405.1-P |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006950 |
GO:GO:0006970 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 |
InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 | UniProt:M4CT63 | PFAM:PF00085 |
PFAM:PF13174 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF374 |
SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0002542DE1 | SEG:seg | : | : |
Description
AT3G58620 (E=1e-279) TTL4 | TTL4 (Tetratricopetide-repeat Thioredoxin-Like 4); binding
Coordinates
chrA09:+:29030506..29033006
Molecular Weight (calculated)
73792.2 Da
IEP (calculated)
9.346
GRAVY (calculated)
-0.504
Length
673 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHYRRHSLE PSIDSISSRF RDSLNFQRDD DDVINKPDFR ELYYPLKPRV SSSAAATPAA SGSSSSSSGS ASGKPSVTSQ LAKRSHSGEL SESGSGAPGS
101: GAKNRTPKPG HRRSASAGTP LIYSGLAFSP VKNRGGGSGA TSPSPGVVPS GNICPSGKIP KTGMASRASV KPETLFTGNG NYGHGNIVRG GGGKAKPETR
201: DPEEVKKAGN DMYRKGNFSE ALSLYDRAIS MSPENPAYRS NRAAALAASG RLKEAVKECL EAVRLDPSYV RAHQRLASLY LRLGEAENAR RHLCFSGQCP
301: DKAELQRVQT LEKHLRLCSE ARKMSDWKKV ITEVDAAIAN GADSSPQLVA CKAEALLRLH QIKDSDLCLS TIQRLDHHHH HHHTQAKLFG MLCDAYVLCV
401: QAQVDMALGR FENALVKAER AMKIDHSNNN PEVVSVLNNV TNVAKARTRG NELFTSGRYS EASVAYGEGL KFDAFNSVLY CNRAACWFKL GVWDQSVDDC
501: NQALRIQPGY TKALLRRAAS YGKLGRWDDA VRDYEVLRKE LPGDSEVAES LQRALLNKSE EHKYLGYNNE VEEVSNLDKF KTATSLPGIS VFYFKSSSNR
601: QSEAISPFIN TLCLRYPLVH FFMVDVDESL ALAKAESIKK VPTFKIYKDG EKVKEMVCPS HKLLEDNVKH FLL
101: GAKNRTPKPG HRRSASAGTP LIYSGLAFSP VKNRGGGSGA TSPSPGVVPS GNICPSGKIP KTGMASRASV KPETLFTGNG NYGHGNIVRG GGGKAKPETR
201: DPEEVKKAGN DMYRKGNFSE ALSLYDRAIS MSPENPAYRS NRAAALAASG RLKEAVKECL EAVRLDPSYV RAHQRLASLY LRLGEAENAR RHLCFSGQCP
301: DKAELQRVQT LEKHLRLCSE ARKMSDWKKV ITEVDAAIAN GADSSPQLVA CKAEALLRLH QIKDSDLCLS TIQRLDHHHH HHHTQAKLFG MLCDAYVLCV
401: QAQVDMALGR FENALVKAER AMKIDHSNNN PEVVSVLNNV TNVAKARTRG NELFTSGRYS EASVAYGEGL KFDAFNSVLY CNRAACWFKL GVWDQSVDDC
501: NQALRIQPGY TKALLRRAAS YGKLGRWDDA VRDYEVLRKE LPGDSEVAES LQRALLNKSE EHKYLGYNNE VEEVSNLDKF KTATSLPGIS VFYFKSSSNR
601: QSEAISPFIN TLCLRYPLVH FFMVDVDESL ALAKAESIKK VPTFKIYKDG EKVKEMVCPS HKLLEDNVKH FLL
001: MSHYRRHSLE PSITSKFRDS LSFQRDDDVI NKPDFRELDF GSPLRPRGSS SAAATPAASG SSSSSSGSAS GKPAVTSQFA RRSHSGELSG LSQTSPVKPG
101: SVNRNLKPGH RRSASAGTPL IYSGLGFSPV NNNNNSSRGG GSGATSPNPG VLPTGNICPS GRILKTGMAT RASVRPETLC TGTANYGHGN IIRTGGKVSH
201: ATKAAAEMSD SEEVKKAGNV MYRKGNYAEA LALYDRAISL SPENPAYRSN RAAALAASGR LEEAVKECLE AVRCDPSYAR AHQRLASLYL RLGEAENARR
301: HLCVSGQCPD QADLQRLQTL EKHLRLCTEA RKIGDWRTVI SEIDAAIANG ADSSPQLVAC KAEAFLRLHQ IKDSDLCISS IPRLDHHHTQ PPEKLFGIVC
401: DAYVLCVQAQ VDMALGRFEN AIVKVERAMT IDHSNSPEVV SVLNNVKNVA KARTRGNELF SSGRYSEASV AYGDGLKLDA FNSVLYCNRA ACWFKLGMWE
501: KSVDDCNQAL RIQPSYTKAL LRRAASYGKL GRWEDAVRDY EVLRKELPGD SEVAESLQRA RNALSNKSEE PKYLGFNNEV EEVSTLDKFK TATSLPGISV
601: FHFKSSSNRQ SEAISPFVNT LCLRYPLVHF FKVDVEESLA LAKAESIKKI PTFKIYKKGE KVKEMVCPSH QLLEDSVTHF LL
101: SVNRNLKPGH RRSASAGTPL IYSGLGFSPV NNNNNSSRGG GSGATSPNPG VLPTGNICPS GRILKTGMAT RASVRPETLC TGTANYGHGN IIRTGGKVSH
201: ATKAAAEMSD SEEVKKAGNV MYRKGNYAEA LALYDRAISL SPENPAYRSN RAAALAASGR LEEAVKECLE AVRCDPSYAR AHQRLASLYL RLGEAENARR
301: HLCVSGQCPD QADLQRLQTL EKHLRLCTEA RKIGDWRTVI SEIDAAIANG ADSSPQLVAC KAEAFLRLHQ IKDSDLCISS IPRLDHHHTQ PPEKLFGIVC
401: DAYVLCVQAQ VDMALGRFEN AIVKVERAMT IDHSNSPEVV SVLNNVKNVA KARTRGNELF SSGRYSEASV AYGDGLKLDA FNSVLYCNRA ACWFKLGMWE
501: KSVDDCNQAL RIQPSYTKAL LRRAASYGKL GRWEDAVRDY EVLRKELPGD SEVAESLQRA RNALSNKSEE PKYLGFNNEV EEVSTLDKFK TATSLPGISV
601: FHFKSSSNRQ SEAISPFVNT LCLRYPLVHF FKVDVEESLA LAKAESIKKI PTFKIYKKGE KVKEMVCPSH QLLEDSVTHF LL
Arabidopsis Description
TTL4TTL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKQ3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.