Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22291 | Soybean | plastid | 81.48 | 94.18 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 24.44 | 62.5 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 57.19 | 54.37 |
| KRH26223 | Soybean | nucleus | 50.67 | 50.59 |
| KRH21985 | Soybean | cytosol | 51.7 | 50.43 |
| KRH27330 | Soybean | cytosol | 51.7 | 50.0 |
| KRH55099 | Soybean | nucleus | 49.93 | 49.7 |
| CDY61202 | Canola | cytosol | 49.19 | 49.48 |
| Bra000267.1-P | Field mustard | cytosol | 49.19 | 49.4 |
| AT2G42580.1 | Thale cress | cytosol | 50.37 | 49.2 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 16.15 | 49.1 |
| GSMUA_Achr10P... | Banana | cytosol | 48.3 | 48.88 |
| CDY42827 | Canola | cytosol | 48.44 | 48.73 |
| CDY51514 | Canola | cytosol | 48.3 | 48.73 |
| CDX71941 | Canola | cytosol | 48.3 | 48.37 |
| CDY55390 | Canola | cytosol | 47.85 | 48.28 |
| CDY49237 | Canola | cytosol | 47.7 | 48.28 |
| AT3G58620.1 | Thale cress | cytosol | 48.74 | 48.24 |
| Bra007405.1-P | Field mustard | cytosol | 48.0 | 48.14 |
| Bra004709.1-P | Field mustard | cytosol | 46.22 | 47.49 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 35.11 | 47.12 |
| Os01t0218200-00 | Rice | plastid | 46.67 | 46.88 |
| Zm00001d008930_P003 | Maize | cytosol | 46.67 | 46.67 |
| Zm00001d039362_P002 | Maize | cytosol | 45.93 | 46.27 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 45.93 | 46.13 |
| EES02247 | Sorghum | plastid | 46.52 | 45.91 |
| Os05t0210600-01 | Rice | cytosol | 27.26 | 45.89 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 45.78 | 45.78 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 45.48 | 45.68 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 44.74 | 45.35 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 44.44 | 44.58 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 42.81 | 44.53 |
| EES01073 | Sorghum | cytosol | 44.74 | 44.35 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 44.89 | 44.23 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 45.63 | 44.13 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 45.33 | 43.9 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 45.04 | 43.8 |
| Zm00001d044479_P001 | Maize | cytosol | 44.15 | 43.76 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 44.59 | 43.75 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 44.44 | 43.6 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 44.15 | 43.31 |
| OQU78515 | Sorghum | cytosol | 44.44 | 42.86 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 43.56 | 42.73 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 44.89 | 42.56 |
| Zm00001d011352_P001 | Maize | cytosol | 42.22 | 41.85 |
| Os05t0587300-01 | Rice | cytosol | 34.22 | 41.62 |
| KRH15375 | Soybean | cytosol | 13.04 | 35.2 |
| KRH08675 | Soybean | cytosol, mitochondrion, plastid | 17.48 | 35.12 |
| KRH59356 | Soybean | plastid | 21.63 | 34.03 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.04 | 32.84 |
| KRG97591 | Soybean | plastid | 26.07 | 32.12 |
| KRH62368 | Soybean | cytosol | 30.96 | 31.96 |
| KRH31282 | Soybean | plastid | 27.26 | 31.62 |
| KRH43206 | Soybean | cytosol, plastid | 25.04 | 30.84 |
| KRH53085 | Soybean | cytosol | 31.7 | 30.66 |
| KRH18895 | Soybean | cytosol | 31.26 | 30.01 |
| KRH16702 | Soybean | nucleus | 30.52 | 29.68 |
| Zm00001d009724_P009 | Maize | cytosol | 41.93 | 26.47 |
| KRH23391 | Soybean | cytosol | 5.93 | 22.35 |
| KRG99844 | Soybean | cytosol | 7.85 | 19.78 |
| KRH46794 | Soybean | cytosol | 7.11 | 17.39 |
| KRH09945 | Soybean | cytosol, endoplasmic reticulum | 1.48 | 17.24 |
| Zm00001d006366_P001 | Maize | cytosol | 0.3 | 0.86 |
| Zm00001d033961_P001 | Maize | cytosol | 0.3 | 0.86 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | EMBL:ACUP02007762 | EnsemblPlantsGene:GLYMA_12G210100 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 |
| UniProt:K7LW63 | EnsemblPlants:KRH27037 | ProteinID:KRH27037 | ProteinID:KRH27037.1 | PFAM:PF00085 | PFAM:PF14559 |
| PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF374 | SMART:SM00028 | SUPFAM:SSF48452 |
| SUPFAM:SSF52833 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain |
| UniParc:UPI0002962984 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:36928617..36932241
Molecular Weight (calculated)
74555.4 Da
IEP (calculated)
9.323
GRAVY (calculated)
-0.313
Length
675 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKKETLIIK REKLQPLSSY HLQYHNSLPH LTIQYKTHIT PSNKTSLLSS NQIRFFLRSI QHSLHRFPIS YITIDKKTTL QNTNTLQSTM SNTLQQHQQC
101: PESKRLDPGS NARRPGHRRS VSAGAPLIYS GGATLLPSGN ICPSGKILKP GLPSRGSNRT DVLGSGTVNY GRGSIVRGVS GNIPVPVGAL PPTVKRALSG
201: SDPEELKRAG NELYRGGNFA EALALYDRAV AISPGNAACR SNRAAALTAL GRLAEAAREC LEAVKLDLAY ARAHKRLASL YLRFGQVENS RQHLCLSGVQ
301: EDKSEEQKLV LLEKHLNRCA DARKVGDWKR VLRESEAAIA VGADFSPQIV ACKVEAYLKL HQLEDAESSL SNVPKLEGCP PECSQTKFFG MVGEAYVPFV
401: CAQVEMALGR FENAVAAAEK ASMLDCSNVE VGRIVNVVKM VARARSRGNE LFSSDKFSEA CSAYGEGLKY DNSNYVLYCN RAICWSKLGL WEQSVQDCSQ
501: ALNIQPNYTK ALFRRAASNT KLERWVEVVK DYKALKRELP NDNEVAESLR QAQLALEKSR QMVYGTKFGV EVEQICALDK FKAALASAGV SVVYFKEASN
601: ELCEELSPFI NTLCVRYPSV KFIKVDVEEC LAIAKAESIR SVPTFKIYKN GEKVNDIIRP THQLLEDSVR KSSSL
101: PESKRLDPGS NARRPGHRRS VSAGAPLIYS GGATLLPSGN ICPSGKILKP GLPSRGSNRT DVLGSGTVNY GRGSIVRGVS GNIPVPVGAL PPTVKRALSG
201: SDPEELKRAG NELYRGGNFA EALALYDRAV AISPGNAACR SNRAAALTAL GRLAEAAREC LEAVKLDLAY ARAHKRLASL YLRFGQVENS RQHLCLSGVQ
301: EDKSEEQKLV LLEKHLNRCA DARKVGDWKR VLRESEAAIA VGADFSPQIV ACKVEAYLKL HQLEDAESSL SNVPKLEGCP PECSQTKFFG MVGEAYVPFV
401: CAQVEMALGR FENAVAAAEK ASMLDCSNVE VGRIVNVVKM VARARSRGNE LFSSDKFSEA CSAYGEGLKY DNSNYVLYCN RAICWSKLGL WEQSVQDCSQ
501: ALNIQPNYTK ALFRRAASNT KLERWVEVVK DYKALKRELP NDNEVAESLR QAQLALEKSR QMVYGTKFGV EVEQICALDK FKAALASAGV SVVYFKEASN
601: ELCEELSPFI NTLCVRYPSV KFIKVDVEEC LAIAKAESIR SVPTFKIYKN GEKVNDIIRP THQLLEDSVR KSSSL
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.