Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G62120.1 | KRH22291 | AT2G42580.1 | 19000166 |
| AT3G62120.1 | KRH27037 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68339 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 99.03 | 99.03 |
| PGSC0003DMT400036645 | Potato | cytosol | 82.33 | 84.29 |
| Solyc03g117330.2.1 | Tomato | cytosol | 81.75 | 83.53 |
| PGSC0003DMT400073336 | Potato | cytosol | 83.5 | 83.5 |
| Solyc06g068320.2.1 | Tomato | cytosol, extracellular, nucleus | 83.11 | 83.11 |
| Bra007663.1-P | Field mustard | cytosol | 82.72 | 83.04 |
| VIT_07s0005g02620.t01 | Wine grape | cytosol | 82.91 | 82.75 |
| CDX76618 | Canola | cytosol | 82.33 | 82.33 |
| Bra003487.1-P | Field mustard | cytosol | 79.22 | 81.6 |
| GSMUA_Achr3P28360_001 | Banana | cytosol | 18.25 | 80.34 |
| EES15248 | Sorghum | cytosol | 79.03 | 80.12 |
| AT3G62120.1 | Thale cress | cytosol | 82.33 | 80.0 |
| EES19704 | Sorghum | cytosol | 78.45 | 79.53 |
| TraesCS1B01G342200.1 | Wheat | cytosol, golgi | 77.86 | 79.41 |
| TraesCS3A01G419600.1 | Wheat | cytosol | 77.86 | 79.41 |
| TraesCS3B01G455000.1 | Wheat | cytosol, extracellular, golgi | 77.86 | 79.41 |
| TraesCS3D01G415200.1 | Wheat | cytosol, golgi | 77.86 | 79.41 |
| HORVU3Hr1G093050.2 | Barley | cytosol | 78.64 | 78.95 |
| Zm00001d053196_P001 | Maize | cytosol | 77.86 | 78.94 |
| CDY25092 | Canola | cytosol | 82.52 | 78.7 |
| TraesCS1D01G210600.3 | Wheat | cytosol | 78.06 | 78.36 |
| CDX67878 | Canola | cytosol | 82.33 | 78.23 |
| Os12t0443700-01 | Rice | cytosol | 76.31 | 77.06 |
| CDY11404 | Canola | cytosol, mitochondrion, plastid, vacuole | 82.52 | 76.03 |
| GSMUA_Achr4P09390_001 | Banana | cytosol | 80.97 | 75.82 |
| KRH16405 | Soybean | cytosol | 19.22 | 73.88 |
| Bra003486.1-P | Field mustard | cytosol | 65.44 | 73.1 |
| TraesCS7A01G200500.1 | Wheat | cytosol | 69.51 | 72.91 |
| TraesCS7B01G107300.1 | Wheat | cytosol | 69.51 | 72.62 |
| Zm00001d002585_P004 | Maize | cytosol | 73.59 | 72.47 |
| TraesCS7D01G203800.1 | Wheat | cytosol | 68.74 | 72.1 |
| HORVU4Hr1G079480.1 | Barley | cytosol | 4.85 | 71.43 |
| HORVU7Hr1G041110.1 | Barley | cytosol | 68.16 | 70.34 |
| CDX67877 | Canola | cytosol | 58.64 | 69.11 |
| CDY30248 | Canola | cytosol | 18.64 | 66.21 |
| CDY25091 | Canola | cytosol | 56.12 | 66.13 |
| Bra017510.1-P | Field mustard | cytosol | 17.67 | 62.76 |
| CDY30246 | Canola | cytosol | 19.61 | 61.96 |
| Bra029197.1-P | Field mustard | cytosol | 25.63 | 60.55 |
| CDY05739 | Canola | cytosol | 13.59 | 58.82 |
| CDX94184 | Canola | cytosol, endoplasmic reticulum | 15.92 | 58.16 |
| Bra028248.1-P | Field mustard | cytosol | 59.81 | 57.25 |
| CDY33873 | Canola | cytosol | 13.01 | 55.37 |
| AT5G10880.1 | Thale cress | cytosol | 33.2 | 55.34 |
| Bra008444.1-P | Field mustard | cytosol | 16.5 | 55.19 |
| CDY67326 | Canola | cytosol | 15.92 | 55.03 |
| Bra037949.1-P | Field mustard | mitochondrion | 15.53 | 54.42 |
| Bra037950.1-P | Field mustard | cytosol | 12.62 | 54.17 |
| CDX74456 | Canola | cytosol | 33.98 | 52.08 |
| CDY30241 | Canola | cytosol | 33.79 | 50.29 |
| KRH33484 | Soybean | plastid | 31.65 | 43.01 |
| KRH08879 | Soybean | plastid | 39.61 | 37.36 |
| KRH38393 | Soybean | plastid | 39.22 | 37.0 |
Protein Annotations
| KEGG:00970+6.1.1.15 | EntrezGene:100782067 | MapMan:17.2.17 | Gene3D:3.30.110.30 | Gene3D:3.30.930.10 | Gene3D:3.40.50.800 |
| EMBL:ACUP02012157 | InterPro:Anticodon-bd | InterPro:Anticodon-bd_dom_sf | EnsemblPlantsGene:GLYMA_19G221400 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004812 | GO:GO:0004827 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0006418 |
| GO:GO:0006433 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0017101 |
| GO:GO:0019538 | UniProt:I1NBI4 | InterPro:IPR006195 | InterPro:IPR017449 | InterPro:IPR036621 | EnsemblPlants:KRG96602 |
| ProteinID:KRG96602 | ProteinID:KRG96602.1 | ProteinID:KRG96603.1 | ProteinID:KRG96604.1 | HAMAP:MF_01571 | PFAM:PF00587 |
| PFAM:PF03129 | PFAM:PF09180 | PRINTS:PR01046 | PFscan:PS50862 | PANTHER:PTHR43382 | PANTHER:PTHR43382:SF2 |
| InterPro:Pro-tRNA-ligase_IIa | InterPro:Pro-tRNA-ligase_IIa_arc-type | InterPro:Pro-tRNA_ligase_II_C | InterPro:Pro-tRNA_synth_II | InterPro:ProRS_core_arch_euk | SMART:SM00946 |
| SUPFAM:SSF52954 | SUPFAM:SSF55681 | SUPFAM:SSF64586 | TIGRFAMs:TIGR00408 | UniParc:UPI000233E48D | InterPro:aa-tRNA-synt_IIb |
| InterPro:aa-tRNA-synth_II | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:47320710..47325740
Molecular Weight (calculated)
58569.0 Da
IEP (calculated)
6.429
GRAVY (calculated)
-0.446
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGTEAKKTE SKKPAAKQSG AKKKEVKKET GLGLTHRKAE NFGEWYSEVV VNAEMIEYYD ISGCYILRPW SMAIWEIMQE FFDPEIKKMK IKNCYFPLFV
101: SPGVLQKEKD HVEGFAPEVA WVTKSGESEL EIPIAIRPTS ETVMYPYYSK WIRGHRDLPL KLNQWCNVVR WEFSNPTPFI RSREFLWQEG HTAFATKDEA
201: DAEVLEILEL YRRIYEEYLA VPVIKGKKSE LEKFAGGLYT TSVEAFIPNT GRGIQGATSH CLGQNFAKMF EINFENEKGE KAMVWQNSWA YSTRTIGVMV
301: MVHGDDKGLV LPPKVASVQV IVIPVPYKDA DTQGIFDACS ATVNTLNEAG IRAESDSRDN YSPGWKYSNW EMKGVPLRIE IGPKDLANKQ VRAVRRDNGA
401: KIDIASADLV VEIKKLLDTI QQNLFDVAKQ KRDECIQIIH TWDEFVQALN QRKMILAPWC DEEEVEADVK ARTKGEMGAA KTLCSPFDQP ELPEGTKCFA
501: SGKPATKWTY WGRSY
101: SPGVLQKEKD HVEGFAPEVA WVTKSGESEL EIPIAIRPTS ETVMYPYYSK WIRGHRDLPL KLNQWCNVVR WEFSNPTPFI RSREFLWQEG HTAFATKDEA
201: DAEVLEILEL YRRIYEEYLA VPVIKGKKSE LEKFAGGLYT TSVEAFIPNT GRGIQGATSH CLGQNFAKMF EINFENEKGE KAMVWQNSWA YSTRTIGVMV
301: MVHGDDKGLV LPPKVASVQV IVIPVPYKDA DTQGIFDACS ATVNTLNEAG IRAESDSRDN YSPGWKYSNW EMKGVPLRIE IGPKDLANKQ VRAVRRDNGA
401: KIDIASADLV VEIKKLLDTI QQNLFDVAKQ KRDECIQIIH TWDEFVQALN QRKMILAPWC DEEEVEADVK ARTKGEMGAA KTLCSPFDQP ELPEGTKCFA
501: SGKPATKWTY WGRSY
001: MADPSEQKEK VVKEKVAKAS SSGQKKKDVK KETGLGLSVK KDENFGEWYS EVCKQDMIEY YDISGCYILR PWSMAIWEIM QIFFDAEIKK MKVKNCYFPL
101: FVSPGVLEKE KDHIEGFAPE VAWVTKSGKS DLEVPIAIRP TSETVMYPYY SKWIRGHRDL PLKLNQWCNV VRWEFSNPTP FIRSREFLWQ EGHTAFATKA
201: EADEEVLQIL ELYRRIYEEY LAVPVVKGMK SENEKFAGGL YTTSVEAFIP NTGRGVQGAT SHCLGQNFAK MFEINFENEK AETEMVWQNS WAYSTRTIGV
301: MIMTHGDDKG LVLPPKVASV QVVVIPVPYK DANTQGIYDA CTATASALCE AGIRAEEDLR DNYSPGWKYS DWEMKGVPLR IEIGPRDLEN DQVRTVRRDN
401: GVKEDIPRGS LVEHVKELLE KIQQNMYEVA KQKREACVQE VKTWDEFIKA LNEKKLILAP WCDEEEVERD VKARTKGETG AAKTLCSPFD QPELPEGTLC
501: FASGKPAKKW TYWGRSY
101: FVSPGVLEKE KDHIEGFAPE VAWVTKSGKS DLEVPIAIRP TSETVMYPYY SKWIRGHRDL PLKLNQWCNV VRWEFSNPTP FIRSREFLWQ EGHTAFATKA
201: EADEEVLQIL ELYRRIYEEY LAVPVVKGMK SENEKFAGGL YTTSVEAFIP NTGRGVQGAT SHCLGQNFAK MFEINFENEK AETEMVWQNS WAYSTRTIGV
301: MIMTHGDDKG LVLPPKVASV QVVVIPVPYK DANTQGIYDA CTATASALCE AGIRAEEDLR DNYSPGWKYS DWEMKGVPLR IEIGPRDLEN DQVRTVRRDN
401: GVKEDIPRGS LVEHVKELLE KIQQNMYEVA KQKREACVQE VKTWDEFIKA LNEKKLILAP WCDEEEVERD VKARTKGETG AAKTLCSPFD QPELPEGTLC
501: FASGKPAKKW TYWGRSY
Arabidopsis Description
Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.