Factsheet for Bra037949.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67326	Canola	cytosol	93.88	92.62
Bra008444.1-P	Field mustard	cytosol	85.03	81.17
Bra037950.1-P	Field mustard	cytosol	65.99	80.83
Bra003486.1-P	Field mustard	cytosol	62.59	19.96
KRH16405	Soybean	cytosol	17.69	19.4
TraesCS3D01G415200.1	Wheat	cytosol, golgi	56.46	16.44
TraesCS3B01G455000.1	Wheat	cytosol, extracellular, golgi	56.46	16.44
TraesCS3A01G419600.1	Wheat	cytosol	56.46	16.44
Bra007663.1-P	Field mustard	cytosol	57.14	16.37
TraesCS7D01G203800.1	Wheat	cytosol	54.42	16.29
TraesCS1B01G342200.1	Wheat	cytosol, golgi	55.78	16.24
Bra003487.1-P	Field mustard	cytosol	55.1	16.2
Zm00001d053196_P001	Maize	cytosol	55.78	16.14
EES15248	Sorghum	cytosol	55.78	16.14
EES19704	Sorghum	cytosol	55.78	16.14
TraesCS7B01G107300.1	Wheat	cytosol	53.74	16.02
HORVU3Hr1G093050.2	Barley	cytosol	55.78	15.98
TraesCS1D01G210600.3	Wheat	cytosol	55.78	15.98
TraesCS7A01G200500.1	Wheat	cytosol	53.06	15.89
HORVU7Hr1G041110.1	Barley	cytosol	53.74	15.83
KRG96602	Soybean	cytosol	54.42	15.53
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	54.42	15.53
Os12t0443700-01	Rice	cytosol	53.06	15.29
PGSC0003DMT400073336	Potato	cytosol	53.06	15.15
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	53.06	15.15
VIT_07s0005g02620.t01	Wine grape	cytosol	53.06	15.12
PGSC0003DMT400036645	Potato	cytosol	51.7	15.11
Solyc03g117330.2.1	Tomato	cytosol	50.34	14.68
GSMUA_Achr4P09390_001	Banana	cytosol	53.74	14.36
Bra028248.1-P	Field mustard	cytosol	47.62	13.01
Zm00001d002585_P004	Maize	cytosol	44.9	12.62
Bra028313.1-P	Field mustard	cytosol	34.69	12.5
KRH33484	Soybean	plastid	25.85	10.03
Bra022597.1-P	Field mustard	plastid	35.37	9.59
Bra029197.1-P	Field mustard	cytosol	12.24	8.26
Bra017510.1-P	Field mustard	cytosol	3.4	3.45
HORVU4Hr1G079480.1	Barley	cytosol	0.0	0.0
GSMUA_Achr3P28360_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra037949.1	EnsemblPlants:Bra037949.1-P	EnsemblPlantsGene:Bra037949	Gene3D:3.30.930.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR43382	SUPFAM:SSF55681	TMHMM:TMhelix	UniParc:UPI00025449EA	UniProt:M4FA35
MapMan:35.1	:	:	:	:	:

Description

AT3G62120 (E=1e-019) | tRNA synthetase class II (G, H, P and S) family protein

Coordinates

chrA10:-:393975..395509

Molecular Weight (calculated)

16735.1 Da

IEP (calculated)

8.784

GRAVY (calculated)

-0.465

Length

147 amino acids

Sequence
(BLAST)

001: MRETMQCQRR RSREFLWQGH TVHATKEDAD KEVLEALDHY RHIYEEYFAV PVVKGMKSEK KFAGARYTTS VEKLVVVYKV QRCLTSHSQI KKEKVKGVAN
101: SWAYSAITIG VMILTYGDDK GLVNPPNVAP IQVRLSEEGN GLDVCDS

Best Arabidopsis Sequence Match ( AT3G62120.3 )
(BLAST)

001: MADPSEQKEK VVKEKVAKAS SSGQKKKDVK KETGLGLSVK KDENFGEWYS EVCKQDMIEY YDISGCYILR PWSMAIWEIM QIFFDAEIKK MKVKNCYFPL
101: FVSPGVLEKE KDHIEGFAPE VAWVTKSGKS DLEVPIAIRP TSETVMYPYY SKWIRGHRDL PLKLNQWCNV VRWEFSNPTP FIRSREFLWQ EGHTAFATKA
201: EADEEVLQIL ELYRRIYEEY LAVPVVKGMK SENEKFAGGL YTTSVEAFIP NTGRGVQGAT SHCLGQNFAK MFEINFENEK AETEMVWQNS WAYSTRTIGV
301: MIMTHGDDKG LVLPPKVASV QVVVIPVPYK DANTQGIYDA CTATASALCE AGIRAEEDLR DNYSPGWKYS DWEMKGVPLR IEIGPRDLEN DQVRTVRRDN
401: GVKEDIPRGS LVEHVKELLE KIQQNMYEVA KQKREACVQE VKTWDEFIKA LNEKKLILAP WCDEEEVERD VKARTKGETG AAKTLCSPFD QPELPEGTLC
501: FASGKPAKKW TYWGRSY

Arabidopsis Description

Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.