CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22291
KRH27037

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62120.1	KRH22291	AT2G42580.1	19000166
AT3G62120.1	KRH27037	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16405	Soybean	cytosol	27.7	78.36
HORVU4Hr1G079480.1	Barley	cytosol	6.07	65.71
GSMUA_Achr3P28360_001	Banana	cytosol	11.61	37.61
KRG96602	Soybean	cytosol	43.01	31.65
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	42.22	31.07
CDX76618	Canola	cytosol	39.84	29.32
PGSC0003DMT400036645	Potato	cytosol	38.79	29.22
Bra007663.1-P	Field mustard	cytosol	39.05	28.85
VIT_07s0005g02620.t01	Wine grape	cytosol	39.05	28.68
Solyc03g117330.2.1	Tomato	cytosol	37.73	28.37
Bra003487.1-P	Field mustard	cytosol	37.2	28.2
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	38.26	28.16
PGSC0003DMT400073336	Potato	cytosol	38.26	28.16
AT3G62120.1	Thale cress	cytosol	38.79	27.74
TraesCS1B01G342200.1	Wheat	cytosol, golgi	36.68	27.52
TraesCS3B01G455000.1	Wheat	cytosol, extracellular, golgi	36.68	27.52
TraesCS3D01G415200.1	Wheat	cytosol, golgi	36.68	27.52
EES15248	Sorghum	cytosol	36.68	27.36
TraesCS3A01G419600.1	Wheat	cytosol	36.41	27.33
TraesCS1D01G210600.3	Wheat	cytosol	36.94	27.29
HORVU3Hr1G093050.2	Barley	cytosol	36.94	27.29
Zm00001d053196_P001	Maize	cytosol	36.41	27.17
EES19704	Sorghum	cytosol	36.41	27.17
GSMUA_Achr4P09390_001	Banana	cytosol	39.05	26.91
Os12t0443700-01	Rice	cytosol	36.15	26.86
CDY11404	Canola	cytosol, mitochondrion, plastid, vacuole	39.31	26.65
CDY25092	Canola	cytosol	37.47	26.3
CDX67878	Canola	cytosol	37.47	26.2
CDY67326	Canola	cytosol	10.29	26.17
TraesCS7D01G203800.1	Wheat	cytosol	33.77	26.07
HORVU7Hr1G041110.1	Barley	cytosol	34.3	26.05
CDY05739	Canola	cytosol	8.18	26.05
Bra008444.1-P	Field mustard	cytosol	10.55	25.97
TraesCS7B01G107300.1	Wheat	cytosol	33.77	25.96
TraesCS7A01G200500.1	Wheat	cytosol	33.51	25.87
Bra037949.1-P	Field mustard	mitochondrion	10.03	25.85
CDX94184	Canola	cytosol, endoplasmic reticulum	9.5	25.53
CDX67877	Canola	cytosol	29.29	25.4
Bra003486.1-P	Field mustard	cytosol	30.08	24.73
CDY30246	Canola	cytosol	10.55	24.54
CDY25091	Canola	cytosol	27.7	24.03
Zm00001d002585_P004	Maize	cytosol	32.19	23.33
CDY33873	Canola	cytosol	7.12	22.31
Bra037950.1-P	Field mustard	cytosol	6.33	20.0
Bra028248.1-P	Field mustard	cytosol	26.91	18.96
KRH38393	Soybean	plastid	20.84	14.47
KRH08879	Soybean	plastid	20.32	14.1
CDY30241	Canola	cytosol	10.29	11.27
CDX74456	Canola	cytosol	8.71	9.82
AT5G10880.1	Thale cress	cytosol	7.92	9.71
Bra017510.1-P	Field mustard	cytosol	3.17	8.28
CDY30248	Canola	cytosol	2.9	7.59
Bra029197.1-P	Field mustard	cytosol	4.22	7.34

Protein Annotations

MapMan:35.1	UniProt:A0A0R0HSH0	EMBL:ACUP02006507	EnsemblPlantsGene:GLYMA_10G125700	GO:GO:0003674	GO:GO:0003824
GO:GO:0004827	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006433	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0017101	GO:GO:0019538	EnsemblPlants:KRH33484	ProteinID:KRH33484	ProteinID:KRH33484.1	PANTHER:PTHR43382
PANTHER:PTHR43382:SF2	SUPFAM:SSF55681	UniParc:UPI0006EDB615	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:32921677..32925457

Molecular Weight (calculated)

43639.3 Da

IEP (calculated)

8.524

GRAVY (calculated)

-0.447

Length

379 amino acids

Sequence
(BLAST)

001: MKRFMLPRNP LMDAVELPSS PSPTPTTSST KPRPSSRKHK PSKENDTPSF ITPSPAKLKS PLPPRPPSSN PLKRKLTAVD AVTNNSLPAP SDSGIKVVVN
101: TEMVEYYDIS SCYILRPWSM AIWEIMQSFI QCMSAILQEH EYRIADLFLL NIYISQSCFN FENNVLEFFD PEVKKMKIKT CYFPLFVSPE ILQKEKDHVE
201: DFAPEYGTLS SPLCGAYRSF DFRSRQFLWQ ERHTAFATKD EADAEVFEIL ELYRRIYEEY LAAFIPNTGR GIQGATSYCL GQNFAKMFEI NFENEKGEKA
301: MVWKSSWAYS TQTMQRGCFR IRTHDQQVTK TQLYRCTRVR PHNSILISEA LLILISINIP KKHEQDLKDG NWVGVKPNP

Best Arabidopsis Sequence Match ( AT3G62120.1 )
(BLAST)

001: MADPSEQKEK VVKEKKEKVK KEKVVKEKVA KASSSGQKKK DVKKETGLGL SVKKDENFGE WYSEVCKQDM IEYYDISGCY ILRPWSMAIW EIMQIFFDAE
101: IKKMKVKNCY FPLFVSPGVL EKEKDHIEGF APEVAWVTKS GKSDLEVPIA IRPTSETVMY PYYSKWIRGH RDLPLKLNQW CNVVRWEFSN PTPFIRSREF
201: LWQEGHTAFA TKAEADEEVL QILELYRRIY EEYLAVPVVK GMKSENEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFEINFE NEKAETEMVW
301: QNSWAYSTRT IGVMIMTHGD DKGLVLPPKV ASVQVVVIPV PYKDANTQGI YDACTATASA LCEAGIRAEE DLRDNYSPGW KYSDWEMKGV PLRIEIGPRD
401: LENDQVRTVR RDNGVKEDIP RGSLVEHVKE LLEKIQQNMY EVAKQKREAC VQEVKTWDEF IKALNEKKLI LAPWCDEEEV ERDVKARTKG ETGAAKTLCS
501: PFDQPELPEG TLCFASGKPA KKWTYWGRSY

Arabidopsis Description

Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.