Factsheet for Os12t0443700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0218200-00
Os05t0210600-01
Os05t0587300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62120.1	Os01t0218200-00	AT2G42580.1	19000166
AT3G62120.1	Os05t0210600-01	AT2G42580.1	19000166
AT3G62120.1	Os05t0587300-01	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053196_P001	Maize	cytosol	89.8	90.16
EES19704	Sorghum	cytosol	89.02	89.37
EES15248	Sorghum	cytosol	88.82	89.17
TraesCS1B01G342200.1	Wheat	cytosol, golgi	88.24	89.11
TraesCS3D01G415200.1	Wheat	cytosol, golgi	87.65	88.51
TraesCS3B01G455000.1	Wheat	cytosol, extracellular, golgi	87.65	88.51
TraesCS3A01G419600.1	Wheat	cytosol	87.25	88.12
HORVU3Hr1G093050.2	Barley	cytosol	88.43	87.91
TraesCS1D01G210600.3	Wheat	cytosol	88.04	87.52
TraesCS7B01G107300.1	Wheat	cytosol	78.82	81.54
TraesCS7D01G203800.1	Wheat	cytosol	78.43	81.47
TraesCS7A01G200500.1	Wheat	cytosol	78.43	81.47
Zm00001d002585_P004	Maize	cytosol	82.94	80.88
PGSC0003DMT400073336	Potato	cytosol	80.39	79.61
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	80.2	79.42
HORVU7Hr1G041110.1	Barley	cytosol	77.65	79.36
PGSC0003DMT400036645	Potato	cytosol	77.06	78.13
GSMUA_Achr3P28360_001	Banana	cytosol	17.84	77.78
VIT_07s0005g02620.t01	Wine grape	cytosol	78.04	77.13
Bra007663.1-P	Field mustard	cytosol	77.45	77.0
Solyc03g117330.2.1	Tomato	cytosol	76.08	76.98
CDX76618	Canola	cytosol	77.45	76.7
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	77.25	76.5
KRG96602	Soybean	cytosol	77.06	76.31
Bra003487.1-P	Field mustard	cytosol	74.31	75.8
AT3G62120.1	Thale cress	cytosol	76.67	73.77
GSMUA_Achr4P09390_001	Banana	cytosol	79.22	73.45
CDY25092	Canola	cytosol	77.25	72.96
CDX67878	Canola	cytosol	77.06	72.51
CDY11404	Canola	cytosol, mitochondrion, plastid, vacuole	77.65	70.84
Bra003486.1-P	Field mustard	cytosol	63.92	70.72
CDX67877	Canola	cytosol	56.67	66.13
CDY30246	Canola	cytosol	20.59	64.42
CDY25091	Canola	cytosol	53.92	62.93
CDY30248	Canola	cytosol	17.84	62.76
Bra017510.1-P	Field mustard	cytosol	17.65	62.07
KRH16405	Soybean	cytosol	16.27	61.94
CDY05739	Canola	cytosol	14.31	61.34
Bra029197.1-P	Field mustard	cytosol	25.69	60.09
Bra028248.1-P	Field mustard	cytosol	60.78	57.62
CDX94184	Canola	cytosol, endoplasmic reticulum	15.49	56.03
CDY33873	Canola	cytosol	13.14	55.37
Bra008444.1-P	Field mustard	cytosol	16.08	53.25
Bra037949.1-P	Field mustard	mitochondrion	15.29	53.06
CDY67326	Canola	cytosol	15.49	53.02
AT5G10880.1	Thale cress	cytosol	31.76	52.43
CDX74456	Canola	cytosol	34.51	52.38
Bra037950.1-P	Field mustard	cytosol	12.16	51.67
CDY30241	Canola	cytosol	34.9	51.45
Os07t0165000-01	Rice	cytosol, mitochondrion, plastid	31.96	43.24
KRH33484	Soybean	plastid	26.86	36.15

Protein Annotations

KEGG:00970+6.1.1.15	MapMan:17.2.17	Gene3D:3.30.110.30	Gene3D:3.30.930.10	Gene3D:3.40.50.800	EntrezGene:4352148
ProteinID:ABA97739.1	EMBL:AK069541	EMBL:AK104881	InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf	ProteinID:BAF29726.2
ProteinID:BAT16995.1	ProteinID:EEE53160.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812
GO:GO:0004827	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006433	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0017101	GO:GO:0019538	InterPro:IPR006195
InterPro:IPR017449	InterPro:IPR036621	HAMAP:MF_01571	EnsemblPlantsGene:Os12g0443700	EnsemblPlants:Os12t0443700-01	PFAM:PF00587
PFAM:PF03129	PFAM:PF09180	PRINTS:PR01046	PFscan:PS50862	PANTHER:PTHR43382	PANTHER:PTHR43382:SF2
InterPro:Pro-tRNA-ligase_IIa	InterPro:Pro-tRNA-ligase_IIa_arc-type	InterPro:Pro-tRNA_ligase_II_C	InterPro:Pro-tRNA_synth_II	InterPro:ProRS_core_arch_euk	UniProt:Q2QS11
SMART:SM00946	SUPFAM:SSF52954	SUPFAM:SSF55681	SUPFAM:SSF64586	TIGRFAMs:TIGR00408	UniParc:UPI000068129E
RefSeq:XP_015620497.1	InterPro:aa-tRNA-synt_IIb	InterPro:aa-tRNA-synth_II	SEG:seg	:	:

Description

Similar to Glu-prolyl-tRNA aminoacyl synthetase (Fragment). (Os12t0443700-01);Similar to Glu-prolyl-tRNA aminoacyl synthetase (Fragment). (Os12t0443700-02);Similar to Aminoacyl-tRNA synthase. (Os12t0443700-03)

Coordinates

chr12:-:14897203..14904687

Molecular Weight (calculated)

57953.2 Da

IEP (calculated)

7.059

GRAVY (calculated)

-0.492

Length

510 amino acids

Sequence
(BLAST)

001: MSSGKGGGGG GKGGGGKKKE VKKETKLGMA YKKDDNFGEW YSEVVVNSEM IEYYDISGCY ILRPWAMEIW ELLKEFFDAE IKKLKLKPYY FPLFVTENVL
101: QKEKDHIEGF APEVAWVTKS GKSDLEAPIA IRPTSETVMY PYFSKWIRSH RDLPLRCNQW CNVVRWEFSN PTPFIRSREF LWQEGHTAFA TKEEADEEVL
201: QILELYRRIY EEFLAVPVSK GRKSEMEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFDITFE NDKGSRSMVW QNSWAYTTRS IGVMVMTHGD
301: DKGLVLPPRV APLQVIVIPV PYKDVDTTAI VNECKKTVET LEKAGIRADL DTRENYSPGW KYSHWEMKGV PLRIEIGPKD MANNQARVVR RDNGAKADIP
401: TADLVEKVNG LLDEVQKNLF ETAKQKRDAC LKVVNTWDEF IVALNDKKLI LAPWCDEEEV EKDVKARTKG DLGAAKTLCT PFEQPDLPEG TTCFASGKPA
501: KKWSFWGRSY

Best Arabidopsis Sequence Match ( AT3G62120.2 )
(BLAST)

001: MADPSEQKEK VVKEKKEKVK KEKVVKEKVA KASSSGQKKK DVKKETGLGL SVKKDENFGE WYSEVCKQDM IEYYDISGCY ILRPWSMAIW EIMQIFFDAE
101: IKKMKVKNCY FPLFVSPGVL EKEKDHIEGF APEVAWVTKS GKSDLEVPIA IRPTSETVMY PYYSKWIRGH RDLPLKLNQW CNVVRWEFSN PTPFIRSREF
201: LWQEGHTAFA TKAEADEEVL QILELYRRIY EEYLAVPVVK GMKSENEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFEINFE NEKAETEMVW
301: QNSWAYSTRT IGVMIMTHGD DKGLVLPPKV ASVQVVVIPV PYKDANTQGI YDACTATASA LCEAGIRAEE DLRDNYSPGW KYSDWEMKGV PLRIEIGPRD
401: LENDQVRTVR RDNGVKEDIP RGSLVEHVKE LLEKIQQNMY EVAKQKREAC VQEVKTWDEF IKALNEKKLI LAPWCDEEEV ERDVKARTKG ETGAAKTLCS
501: PFDQPELPEG TLCFASGKPA KKWTYWGRSY

Arabidopsis Description

Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.