Factsheet for Bra029197.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017510.1-P	Field mustard	cytosol	66.06	99.31
CDY30241	Canola	cytosol	86.24	54.34
AT5G10880.1	Thale cress	cytosol	63.76	44.98
Bra028248.1-P	Field mustard	cytosol	89.91	36.43
Bra003486.1-P	Field mustard	cytosol	66.06	31.24
Bra007663.1-P	Field mustard	cytosol	63.76	27.1
PGSC0003DMT400073336	Potato	cytosol	61.47	26.02
PGSC0003DMT400036645	Potato	cytosol	59.63	25.84
Os12t0443700-01	Rice	cytosol	60.09	25.69
KRG96602	Soybean	cytosol	60.55	25.63
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	60.55	25.63
Solyc03g117330.2.1	Tomato	cytosol	59.17	25.6
TraesCS3D01G415200.1	Wheat	cytosol, golgi	59.17	25.54
TraesCS3B01G455000.1	Wheat	cytosol, extracellular, golgi	59.17	25.54
TraesCS3A01G419600.1	Wheat	cytosol	59.17	25.54
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	60.09	25.44
Zm00001d053196_P001	Maize	cytosol	59.17	25.39
TraesCS1B01G342200.1	Wheat	cytosol, golgi	58.72	25.35
EES15248	Sorghum	cytosol	58.72	25.2
HORVU3Hr1G093050.2	Barley	cytosol	59.17	25.15
EES19704	Sorghum	cytosol	58.26	25.0
TraesCS1D01G210600.3	Wheat	cytosol	58.72	24.95
TraesCS7A01G200500.1	Wheat	cytosol	55.96	24.85
VIT_07s0005g02620.t01	Wine grape	cytosol	58.26	24.61
TraesCS7B01G107300.1	Wheat	cytosol	55.5	24.54
Zm00001d002585_P004	Maize	cytosol	58.26	24.28
Bra003487.1-P	Field mustard	cytosol	55.5	24.2
HORVU7Hr1G041110.1	Barley	cytosol	55.05	24.05
TraesCS7D01G203800.1	Wheat	cytosol	54.13	24.03
GSMUA_Achr4P09390_001	Banana	cytosol	60.55	24.0
Bra037950.1-P	Field mustard	cytosol	8.72	15.83
Bra022597.1-P	Field mustard	plastid	37.16	14.94
Bra028313.1-P	Field mustard	cytosol	27.52	14.71
Bra037949.1-P	Field mustard	mitochondrion	8.26	12.24
Bra008444.1-P	Field mustard	cytosol	8.26	11.69
KRH33484	Soybean	plastid	7.34	4.22
GSMUA_Achr3P28360_001	Banana	cytosol	0.0	0.0
HORVU4Hr1G079480.1	Barley	cytosol	0.0	0.0
KRH16405	Soybean	cytosol	0.0	0.0

Protein Annotations

KEGG:00970+6.1.1.15	Gene3D:3.30.110.30	Gene3D:3.40.50.800	MapMan:35.1	InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf
EnsemblPlantsGene:Bra029197	EnsemblPlants:Bra029197.1	EnsemblPlants:Bra029197.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004827	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006433	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR017449	InterPro:IPR036621	UniProt:M4EK80
PFAM:PF03129	PFAM:PF09180	PANTHER:PTHR43382	PANTHER:PTHR43382:SF2	InterPro:Pro-tRNA_ligase_II_C	InterPro:Pro-tRNA_synth_II
SMART:SM00946	SUPFAM:SSF52954	SUPFAM:SSF64586	UniParc:UPI0002545F92	SEG:seg	:

Description

AT5G10880 (E=3e-070) | tRNA synthetase-related / tRNA ligase-related

Coordinates

chrA02:+:26598149..26598805

Molecular Weight (calculated)

24714.8 Da

IEP (calculated)

7.213

GRAVY (calculated)

-0.448

Length

218 amino acids

Sequence
(BLAST)

001: MAMTHGDVKG LVLPPKVACY QVVVVPVPFK GVDTKRISHE CQAVKTALQG AGVRALVDEG DNYACGWKYA AWEMKGVPLR IELGSKDLEK NQVRVVRRDT
101: GVKMDVIRVD LVERVKGLME EIQRDLYVVA KRKLEESIQK VETWDEFKEA LRQKNLVLAP WCDEVEVEND VKENSKGENE AGAKTLCTPF EQPELREDTL
201: CFASGKPAKK WTYWGRSY

Best Arabidopsis Sequence Match ( AT5G10880.1 )
(BLAST)

001: MVKETRLGIT AKKDEDFGKW YSEACRFGEL VEYYESVKGC YILKPSGISD EYLERYTNTT LKGLLQRLLG LQELVDKRTQ GPPFEAACMT HGDDKGLVFP
101: PKVAPVQVVV IHVPIKGAAD YQELCDACEA VESTLLGAGI RAEADIRDNY SCGWKYADQE LTGVPLRIET GPRDLANDQV RIVTRDNGAK MDVKRGDLIE
201: QVKDLLEKIQ SNLYDVAKRK VEECTQKVET WDEFVEALSQ KKLILAPWCD KVEVEKDVKR RTRGDETGGG GGGAKTLCTP LEQPELGEET LCFASGKPAK
301: KWSYWGRSY

Arabidopsis Description

Uncharacterized protein T30N20_150 [Source:UniProtKB/TrEMBL;Acc:Q9LEV2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.