Factsheet for Bra028313.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2
plastid 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00534	Canola	cytosol	94.36	97.47
VIT_16s0050g00960.t01	Wine grape	cytosol	69.36	63.17
Os07t0165000-01	Rice	cytosol, mitochondrion, plastid	57.35	62.07
GSMUA_Achr5P23600_001	Banana	cytosol	65.93	60.04
Bra022597.1-P	Field mustard	plastid	76.72	57.75
AT5G52520.1	Thale cress	plastid	75.74	56.91
PGSC0003DMT400070798	Potato	plastid	68.87	51.37
KRH08879	Soybean	plastid	68.38	51.1
KRH38393	Soybean	plastid	68.14	50.92
Solyc01g096870.2.1	Tomato	plastid	68.14	50.82
EER95900	Sorghum	mitochondrion	65.93	50.75
Zm00001d018870_P001	Maize	plastid	65.69	49.91
HORVU2Hr1G057880.3	Barley	mitochondrion	65.2	49.17
TraesCS2A01G246200.1	Wheat	mitochondrion	65.2	49.17
TraesCS2D01G248600.1	Wheat	mitochondrion	65.2	49.17
TraesCS2B01G270500.1	Wheat	mitochondrion	64.95	48.98
GSMUA_Achr7P07780_001	Banana	cytosol	15.93	44.22
Bra008444.1-P	Field mustard	cytosol	13.48	35.71
Bra037949.1-P	Field mustard	mitochondrion	12.5	34.69
Bra037950.1-P	Field mustard	cytosol	9.56	32.5
Bra003486.1-P	Field mustard	cytosol	36.27	32.1
Bra007663.1-P	Field mustard	cytosol	37.25	29.63
Bra003487.1-P	Field mustard	cytosol	35.54	29.0
Bra028248.1-P	Field mustard	cytosol	37.01	28.07
Bra029197.1-P	Field mustard	cytosol	14.71	27.52
Bra017510.1-P	Field mustard	cytosol	9.07	25.52
GSMUA_Achr7P07770_001	Banana	cytosol	0.25	6.25

Protein Annotations

MapMan:17.2.17	Gene3D:3.30.930.10	Gene3D:3.40.50.800	InterPro:Anticodon-bd_dom_sf	EnsemblPlantsGene:Bra028313	EnsemblPlants:Bra028313.1
EnsemblPlants:Bra028313.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0005488
GO:GO:0005524	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR006195	InterPro:IPR036621	UniProt:M4EHP8
PFAM:PF00587	PFscan:PS50862	PANTHER:PTHR43382	PANTHER:PTHR43382:SF3	SUPFAM:SSF52954	SUPFAM:SSF55681
UniParc:UPI00025439BA	InterPro:aa-tRNA-synt_IIb	InterPro:aa-tRNA-synth_II	SEG:seg	:	:

Description

AT5G52520 (E=5e-098) OVA6, PRORS1 | OVA6 (OVULE ABORTION 6); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / proline-tRNA ligase

Coordinates

chrA01:-:18675770..18679523

Molecular Weight (calculated)

44999.7 Da

IEP (calculated)

5.919

GRAVY (calculated)

-0.269

Length

408 amino acids

Sequence
(BLAST)

001: MFIPYSFIEK EDSQVEGFSP ELALVTVGGG NELEEKLVVR PTSETIVNHP WANVTRWEMR TKPFIRTLEF LWQEGHTAHA TPEEAEKEAK QMIEIYTRFA
101: FEQTAIPVIA GRKSKLETFA GADTTYTIEA MMGDRKALQA GTSHNLGQNF SRAFGTQFHD EDGERQHVWQ TSLAVSTRFV GGIIMTHGDD TGLMLPPKIA
201: PIQVVTVPIW KKETEKTGVL TAASSVKEVL QAAGGVPIRI EIGPRDVSSN CVVVSRRNIP GKAGKVFGIS MEPSTLVSYG KEKLDEIQSS LLEKAVTFRD
301: INIVDVKSYE ELKVAISSGK WARGPWSASD SDEQRLGISP GIMSKEGDTT FQISYGGKFV SDGGDISYMG GETHIFQTKA QALFRGLKND FPCLWMVSKS
401: GTNYCMIP

Best Arabidopsis Sequence Match ( AT5G52520.1 )
(BLAST)

001: MVSSSLRLPS LTSLLFPATT RYPATLRRTV CLRNRPLSGF ATAPSGTASP ETKSSEVDRL RSDRAVTPRS QDFNAWYLDV IASAELADYG PVRGTMVIRP
101: YGYAIWEAIQ DYLNVKFKET GHSNMYFPQF IPYSFIEKEA SHVEGFSPEL ALVTVGGGKE LEEKLVVRPT SETIVNHMFT QWIHSYRDLP LMINQWANVT
201: RWEMRTKPFI RTLEFLWQEG HTAHATPEEA EKEAKQMIEI YTRFAFEQTA IPVIPGRKSK LETFAGADIT YTIEAMMGDR KALQAGTSHN LGQNFSRAFG
301: TQFADENGER QHVWQTSWAV STRFVGGIIM THGDDTGLML PPKIAPIQVV IVPIWKKDTE KTGVLSAASS VKEALQTAGV RVKLDDTDQR TPGWKFNFWE
401: MKGIPLRIEI GPRDVSSNSV VVSRRDVPGK AGKVFGISME PSTLVAYVKE KLDEIQTSLL EKALSFRDSN IVDVNSYAEL KDAISSGKWA RGPWSASDAD
501: EQRVKEETGA TIRCFPFEQT QGTKTCLMTG NPAEEVAIFA KSY

Arabidopsis Description

OVA6Proline--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.