Factsheet for HORVU2Hr1G057880.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
cytosol 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	cytosol, mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G248600.1	Wheat	mitochondrion	97.41	97.41
TraesCS2A01G246200.1	Wheat	mitochondrion	97.41	97.41
TraesCS2B01G270500.1	Wheat	mitochondrion	97.23	97.23
Os07t0165000-01	Rice	cytosol, mitochondrion, plastid	64.51	92.57
GSMUA_Achr7P07770_001	Banana	cytosol	2.59	87.5
Zm00001d018870_P001	Maize	plastid	85.77	86.41
GSMUA_Achr5P23600_001	Banana	cytosol	71.35	86.16
EER95900	Sorghum	mitochondrion	83.92	85.66
VIT_16s0050g00960.t01	Wine grape	cytosol	69.13	83.48
AT5G52520.1	Thale cress	plastid	74.31	74.03
PGSC0003DMT400070798	Potato	plastid	74.31	73.49
CDY27062	Canola	plastid	73.57	73.43
KRH38393	Soybean	plastid	73.94	73.26
KRH08879	Soybean	plastid	73.94	73.26
Bra022597.1-P	Field mustard	plastid	73.38	73.25
Solyc01g096870.2.1	Tomato	plastid	73.94	73.13
CDY27824	Canola	mitochondrion, plastid	72.09	72.9
CDX91656	Canola	plastid	68.21	72.78
GSMUA_Achr7P07780_001	Banana	cytosol	17.74	65.31
Bra028313.1-P	Field mustard	cytosol	49.17	65.2
CDY00534	Canola	cytosol	45.84	62.78
HORVU3Hr1G093050.2	Barley	cytosol	37.71	39.77
HORVU7Hr1G041110.1	Barley	cytosol	34.38	37.27
HORVU4Hr1G079480.1	Barley	cytosol	1.66	25.71

Protein Annotations

KEGG:00970+6.1.1.15	MapMan:17.2.17	Gene3D:3.30.110.30	Gene3D:3.30.930.10	Gene3D:3.40.50.800	InterPro:Anticodon-bd
InterPro:Anticodon-bd_dom_sf	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812
GO:GO:0004827	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006433
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009553	GO:GO:0009570	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010109
GO:GO:0015979	GO:GO:0019538	GO:GO:0048316	GO:GO:0048481	EnsemblPlantsGene:HORVU2Hr1G057880	EnsemblPlants:HORVU2Hr1G057880.3
InterPro:IPR006195	InterPro:IPR017449	InterPro:IPR036621	UniProt:M0WPP4	HAMAP:MF_01571	PFAM:PF00587
PFAM:PF03129	PFAM:PF09180	PRINTS:PR01046	PFscan:PS50862	PANTHER:PTHR43382	PANTHER:PTHR43382:SF3
InterPro:Pro-tRNA-ligase_IIa	InterPro:Pro-tRNA-ligase_IIa_arc-type	InterPro:Pro-tRNA_ligase_II_C	InterPro:Pro-tRNA_synth_II	InterPro:ProRS_core_arch_euk	SMART:SM00946
SUPFAM:SSF52954	SUPFAM:SSF55681	SUPFAM:SSF64586	TIGRFAMs:TIGR00408	UniParc:UPI000295D674	InterPro:aa-tRNA-synt_IIb
InterPro:aa-tRNA-synth_II	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:373690065..373694302

Molecular Weight (calculated)

60471.5 Da

IEP (calculated)

7.675

GRAVY (calculated)

-0.305

Length

541 amino acids

Sequence
(BLAST)

001: MASLLRLPSL LAPAAARPAA LLRHRGRCIH TSPARLCAAA TNAGASSAAP AKMETRGGDR EGQVTPRSTD FNAWYTDVIA AAELADYGPV RGTMVIRPYG
101: YAIWEAIQDY LNVKFKETGH SNMYFPQFIP YSFIEKEASH VEGFSPELAV VTIGGGKELE EKLVVRPTSE TIVNHMFTKW IQSYRDLPLM INQWANVTRW
201: EMRTKPFIRT LEFLWQEGHT AHATLEEAEK EAMQMIDVYT KFSYEQAAIP VIPGRKSRVE TFAGADRTYT IEAMMGDKKA LQAGTSHNLG QNFSRAFETQ
301: FMDENGQLEH VWQTSWAIST RFVGGIIMTH GDDAGLMLPP RIAPIQVVIV PIWKKGDEKR VVMEAVASVQ NTLKEAGIRV KVDNSELRTP GWKFNFYEMK
401: GVPIRIELGP RDVKNRSVVL SRRDVPGKQG KEFGISMEPS ILVDHIKGRL EEIQASLLQK AITFRDSNIV DVNSYGELKE VIAEGKWARG PWSASDADEL
501: KVKEETSATI RCFPFDQPGG AKKCFMTGNP TDEVAIFAKS Y

Best Arabidopsis Sequence Match ( AT5G52520.1 )
(BLAST)

001: MVSSSLRLPS LTSLLFPATT RYPATLRRTV CLRNRPLSGF ATAPSGTASP ETKSSEVDRL RSDRAVTPRS QDFNAWYLDV IASAELADYG PVRGTMVIRP
101: YGYAIWEAIQ DYLNVKFKET GHSNMYFPQF IPYSFIEKEA SHVEGFSPEL ALVTVGGGKE LEEKLVVRPT SETIVNHMFT QWIHSYRDLP LMINQWANVT
201: RWEMRTKPFI RTLEFLWQEG HTAHATPEEA EKEAKQMIEI YTRFAFEQTA IPVIPGRKSK LETFAGADIT YTIEAMMGDR KALQAGTSHN LGQNFSRAFG
301: TQFADENGER QHVWQTSWAV STRFVGGIIM THGDDTGLML PPKIAPIQVV IVPIWKKDTE KTGVLSAASS VKEALQTAGV RVKLDDTDQR TPGWKFNFWE
401: MKGIPLRIEI GPRDVSSNSV VVSRRDVPGK AGKVFGISME PSTLVAYVKE KLDEIQTSLL EKALSFRDSN IVDVNSYAEL KDAISSGKWA RGPWSASDAD
501: EQRVKEETGA TIRCFPFEQT QGTKTCLMTG NPAEEVAIFA KSY

Arabidopsis Description

OVA6Proline--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.