Factsheet for GSMUA_Achr7P07770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1
cytosol 2
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, extracellular, nucleus, plasma membrane, plastid, vacuole
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0165000-01	Rice	cytosol, mitochondrion, plastid	87.5	3.71
GSMUA_Achr5P23600_001	Banana	cytosol	93.75	3.35
TraesCS2D01G248600.1	Wheat	mitochondrion	93.75	2.77
TraesCS2B01G270500.1	Wheat	mitochondrion	93.75	2.77
TraesCS2A01G246200.1	Wheat	mitochondrion	93.75	2.77
CDX91656	Canola	plastid	87.5	2.76
VIT_16s0050g00960.t01	Wine grape	cytosol	75.0	2.68
EER95900	Sorghum	mitochondrion	87.5	2.64
Zm00001d018870_P001	Maize	plastid	87.5	2.61
HORVU2Hr1G057880.3	Barley	mitochondrion	87.5	2.59
Bra022597.1-P	Field mustard	plastid	87.5	2.58
CDY27062	Canola	plastid	87.5	2.58
AT5G52520.1	Thale cress	plastid	87.5	2.58
KRH08879	Soybean	plastid	87.5	2.56
PGSC0003DMT400070798	Potato	plastid	87.5	2.56
Solyc01g096870.2.1	Tomato	plastid	87.5	2.56
CDY27824	Canola	mitochondrion, plastid	81.25	2.43
KRH38393	Soybean	plastid	81.25	2.38
GSMUA_Achr4P09390_001	Banana	cytosol	31.25	0.91
CDY00534	Canola	cytosol	6.25	0.25
Bra028313.1-P	Field mustard	cytosol	6.25	0.25
GSMUA_Achr7P07780_001	Banana	cytosol	0.0	0.0
GSMUA_Achr3P28360_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr7P07770_001

EnsemblPlants:GSMUA_Achr7T07770_001

EnsemblPlantsGene:GSMUA_Achr7G07770_001

UniParc:UPI0002960669

UniProt:M0TFL7

MapMan:35.2

Description

prolyl-tRNA synthetase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G07770_001]

Coordinates

chr7:-:5782179..5782229

Molecular Weight (calculated)

1714.0 Da

IEP (calculated)

4.184

GRAVY (calculated)

-0.025

Length

16 amino acids

Sequence
(BLAST)

1: MTGNPADEVA IFAKSY

Best Arabidopsis Sequence Match ( AT5G52520.1 )
(BLAST)

001: MVSSSLRLPS LTSLLFPATT RYPATLRRTV CLRNRPLSGF ATAPSGTASP ETKSSEVDRL RSDRAVTPRS QDFNAWYLDV IASAELADYG PVRGTMVIRP
101: YGYAIWEAIQ DYLNVKFKET GHSNMYFPQF IPYSFIEKEA SHVEGFSPEL ALVTVGGGKE LEEKLVVRPT SETIVNHMFT QWIHSYRDLP LMINQWANVT
201: RWEMRTKPFI RTLEFLWQEG HTAHATPEEA EKEAKQMIEI YTRFAFEQTA IPVIPGRKSK LETFAGADIT YTIEAMMGDR KALQAGTSHN LGQNFSRAFG
301: TQFADENGER QHVWQTSWAV STRFVGGIIM THGDDTGLML PPKIAPIQVV IVPIWKKDTE KTGVLSAASS VKEALQTAGV RVKLDDTDQR TPGWKFNFWE
401: MKGIPLRIEI GPRDVSSNSV VVSRRDVPGK AGKVFGISME PSTLVAYVKE KLDEIQTSLL EKALSFRDSN IVDVNSYAEL KDAISSGKWA RGPWSASDAD
501: EQRVKEETGA TIRCFPFEQT QGTKTCLMTG NPAEEVAIFA KSY

Arabidopsis Description

OVA6Proline--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.