Factsheet for GSMUA_Achr5P23600_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P07770_001	Banana	cytosol	3.35	93.75
VIT_16s0050g00960.t01	Wine grape	cytosol	87.28	87.28
Os07t0165000-01	Rice	cytosol, mitochondrion, plastid	70.76	84.08
GSMUA_Achr7P07780_001	Banana	cytosol	24.11	73.47
EER95900	Sorghum	mitochondrion	85.71	72.45
HORVU2Hr1G057880.3	Barley	mitochondrion	86.16	71.35
Zm00001d018870_P001	Maize	plastid	85.49	71.32
TraesCS2A01G246200.1	Wheat	mitochondrion	85.94	71.16
TraesCS2D01G248600.1	Wheat	mitochondrion	85.94	71.16
TraesCS2B01G270500.1	Wheat	mitochondrion	85.71	70.98
PGSC0003DMT400070798	Potato	plastid	85.94	70.38
Solyc01g096870.2.1	Tomato	plastid	85.49	70.02
AT5G52520.1	Thale cress	plastid	84.82	69.98
CDY27824	Canola	mitochondrion, plastid	83.48	69.91
KRH08879	Soybean	plastid	84.82	69.6
CDY27062	Canola	plastid	84.15	69.56
KRH38393	Soybean	plastid	84.6	69.41
Bra022597.1-P	Field mustard	plastid	83.71	69.19
CDX91656	Canola	plastid	77.01	68.05
Bra028313.1-P	Field mustard	cytosol	60.04	65.93
CDY00534	Canola	cytosol	56.03	63.54
GSMUA_Achr3P28360_001	Banana	cytosol	10.94	41.88
GSMUA_Achr4P09390_001	Banana	cytosol	43.97	35.82

Protein Annotations

KEGG:00970+6.1.1.15	MapMan:17.2.17	Gene3D:3.30.110.30	Gene3D:3.30.930.10	Gene3D:3.40.50.800	InterPro:Anticodon-bd
InterPro:Anticodon-bd_dom_sf	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812
GO:GO:0004827	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006433
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009553	GO:GO:0009570	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0010109
GO:GO:0015979	GO:GO:0019538	GO:GO:0048316	GO:GO:0048481	EnsemblPlantsGene:GSMUA_Achr5G23600_001	EnsemblPlants:GSMUA_Achr5P23600_001
EnsemblPlants:GSMUA_Achr5T23600_001	InterPro:IPR006195	InterPro:IPR017449	InterPro:IPR036621	UniProt:M0T135	HAMAP:MF_01571
PFAM:PF00587	PFAM:PF03129	PFAM:PF09180	PRINTS:PR01046	PFscan:PS50862	PANTHER:PTHR43382
PANTHER:PTHR43382:SF3	InterPro:Pro-tRNA-ligase_IIa	InterPro:Pro-tRNA-ligase_IIa_arc-type	InterPro:Pro-tRNA_ligase_II_C	InterPro:Pro-tRNA_synth_II	InterPro:ProRS_core_arch_euk
SMART:SM00946	SUPFAM:SSF52954	SUPFAM:SSF55681	SUPFAM:SSF64586	TIGRFAMs:TIGR00408	UniParc:UPI00029503FD
InterPro:aa-tRNA-synt_IIb	InterPro:aa-tRNA-synth_II	:	:	:	:

Description

Prolyl-tRNA synthetase [Source:GMGC_GENE;Acc:GSMUA_Achr5G23600_001]

Coordinates

chr5:+:25292643..25301695

Molecular Weight (calculated)

50866.8 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.369

Length

448 amino acids

Sequence
(BLAST)

001: MVIRPYGYAI WEAIQEYLNV KFKETGHSNM YFPQFIPYSF IEKEASHVEG FSPELALVTI GGGKELEEKL VVRPTSETIV NHMFTQWIHS YRDLPLMINQ
101: WANVTRWEMR TKPFVRTLEF LWQEGHTAHA TLEEAEKEAL QMIDVYKKFS YEQAAIPVIV GRKSRAETFA GAIRTYTIEA MMGDRKALQA GTSHNLGQNF
201: SRAFGTQFTD ENGQRQHVWQ TSWAVSTRFV GGIIMTHGDD AGLMLPPRIA PIQVIVVPIW KTADEKNGVM NAVSSLKEVL HKAEIRVKID DTEQRTPGWK
301: FNFWEMKGVP LRIEVGPRDV ANKSVVVSRR DIPGKPGKDF GISMEPSVLV THIKSRLEEI QTSLLQRATS FRDSNIVDVN SYDELKEAIA QGKWARGPWS
401: ASDAEEVKVK EETGATIRCF PFEQPQGQKK CFMTGNPADE VAIFAKSY

Best Arabidopsis Sequence Match ( AT5G52520.1 )
(BLAST)

001: MVSSSLRLPS LTSLLFPATT RYPATLRRTV CLRNRPLSGF ATAPSGTASP ETKSSEVDRL RSDRAVTPRS QDFNAWYLDV IASAELADYG PVRGTMVIRP
101: YGYAIWEAIQ DYLNVKFKET GHSNMYFPQF IPYSFIEKEA SHVEGFSPEL ALVTVGGGKE LEEKLVVRPT SETIVNHMFT QWIHSYRDLP LMINQWANVT
201: RWEMRTKPFI RTLEFLWQEG HTAHATPEEA EKEAKQMIEI YTRFAFEQTA IPVIPGRKSK LETFAGADIT YTIEAMMGDR KALQAGTSHN LGQNFSRAFG
301: TQFADENGER QHVWQTSWAV STRFVGGIIM THGDDTGLML PPKIAPIQVV IVPIWKKDTE KTGVLSAASS VKEALQTAGV RVKLDDTDQR TPGWKFNFWE
401: MKGIPLRIEI GPRDVSSNSV VVSRRDVPGK AGKVFGISME PSTLVAYVKE KLDEIQTSLL EKALSFRDSN IVDVNSYAEL KDAISSGKWA RGPWSASDAD
501: EQRVKEETGA TIRCFPFEQT QGTKTCLMTG NPAEEVAIFA KSY

Arabidopsis Description

OVA6Proline--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.