CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028313.1-P	Field mustard	cytosol	97.47	94.36
Os07t0165000-01	Rice	cytosol, mitochondrion, plastid	58.73	61.54
VIT_16s0050g00960.t01	Wine grape	cytosol	67.09	59.15
CDY27824	Canola	mitochondrion, plastid	76.46	56.45
GSMUA_Achr5P23600_001	Banana	cytosol	63.54	56.03
CDY27062	Canola	plastid	74.68	54.43
AT5G52520.1	Thale cress	plastid	73.67	53.59
CDX91656	Canola	plastid	66.84	52.07
PGSC0003DMT400070798	Potato	plastid	66.58	48.08
KRH08879	Soybean	plastid	66.08	47.8
KRH38393	Soybean	plastid	65.82	47.62
Solyc01g096870.2.1	Tomato	plastid	65.82	47.53
EER95900	Sorghum	mitochondrion	63.54	47.36
Zm00001d018870_P001	Maize	plastid	63.29	46.55
TraesCS2D01G248600.1	Wheat	mitochondrion	63.04	46.03
TraesCS2A01G246200.1	Wheat	mitochondrion	63.04	46.03
TraesCS2B01G270500.1	Wheat	mitochondrion	62.78	45.84
HORVU2Hr1G057880.3	Barley	mitochondrion	62.78	45.84
GSMUA_Achr7P07780_001	Banana	cytosol	16.46	44.22
CDY05739	Canola	cytosol	11.9	39.5
CDY33873	Canola	cytosol	11.39	37.19
CDX94184	Canola	cytosol, endoplasmic reticulum	13.16	36.88
CDY67326	Canola	cytosol	12.91	34.23
CDY30246	Canola	cytosol	13.42	32.52
CDX67877	Canola	cytosol	31.14	28.15
CDX76618	Canola	cytosol	35.95	27.57
CDY25091	Canola	cytosol	29.87	27.0
CDY30248	Canola	cytosol	9.87	26.9
CDY25092	Canola	cytosol	35.44	25.93
CDX67878	Canola	cytosol	35.44	25.83
CDY11404	Canola	cytosol, mitochondrion, plastid, vacuole	35.95	25.4
CDX74456	Canola	cytosol	16.96	19.94
CDY30241	Canola	cytosol	15.44	17.63
GSMUA_Achr7P07770_001	Banana	cytosol	0.25	6.25

Protein Annotations

KEGG:00970+6.1.1.15	MapMan:17.2.17	Gene3D:3.30.930.10	Gene3D:3.40.50.800	GO:A0A078EIH0	InterPro:Anticodon-bd_dom_sf
EnsemblPlants:CDY00534	ProteinID:CDY00534	ProteinID:CDY00534.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004812	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00110274001
InterPro:IPR006195	InterPro:IPR036621	PFAM:PF00587	PFscan:PS50862	PANTHER:PTHR43382	PANTHER:PTHR43382:SF3
SUPFAM:SSF52954	SUPFAM:SSF55681	UniParc:UPI0004EEA3E5	InterPro:aa-tRNA-synt_IIb	InterPro:aa-tRNA-synth_II	SEG:seg

Description

BnaA10g07390D

Coordinates

chrLK031919:+:1186838..1191422

Molecular Weight (calculated)

43583.2 Da

IEP (calculated)

6.960

GRAVY (calculated)

-0.276

Length

395 amino acids

Sequence
(BLAST)

001: MRQRLIYPEL ALVTVGGGNE LEEKLVVRPT SETIVNHPAN VTRWEMRTKP FIRTLEFLWQ EGHTAHATPE EAEKEAKQMI EIYTRFAFEQ TAIPVIAGRK
101: SKLETFAGAD TTYTIEVMMG DRKALQAGTS HNLGQNFSRA FGTQFHDEDG ERQHVWQTSL AVSTRFVGGI IMTHGDDTGL MLPPKIAPIQ VVTVPIWKKE
201: TEKTGVLTAA SSVKEVLQAA GGVPIRIEIG PRDVSSNCVV VSRRNIPGKA GKVFGISMEP STLVSYGKEK LDEIQSSLLE KAVTFRDINI VDVKSYEELK
301: VAISSGKWAR GPWSASDSDE QRLGISPGIM SKEGDTTFQI SYGGKFVSDG GDISYMGGET HIFQTKSQAL FRGLKNDFPC LWMVSKSGTN YCMIP

Best Arabidopsis Sequence Match ( AT5G52520.1 )
(BLAST)

001: MVSSSLRLPS LTSLLFPATT RYPATLRRTV CLRNRPLSGF ATAPSGTASP ETKSSEVDRL RSDRAVTPRS QDFNAWYLDV IASAELADYG PVRGTMVIRP
101: YGYAIWEAIQ DYLNVKFKET GHSNMYFPQF IPYSFIEKEA SHVEGFSPEL ALVTVGGGKE LEEKLVVRPT SETIVNHMFT QWIHSYRDLP LMINQWANVT
201: RWEMRTKPFI RTLEFLWQEG HTAHATPEEA EKEAKQMIEI YTRFAFEQTA IPVIPGRKSK LETFAGADIT YTIEAMMGDR KALQAGTSHN LGQNFSRAFG
301: TQFADENGER QHVWQTSWAV STRFVGGIIM THGDDTGLML PPKIAPIQVV IVPIWKKDTE KTGVLSAASS VKEALQTAGV RVKLDDTDQR TPGWKFNFWE
401: MKGIPLRIEI GPRDVSSNSV VVSRRDVPGK AGKVFGISME PSTLVAYVKE KLDEIQTSLL EKALSFRDSN IVDVNSYAEL KDAISSGKWA RGPWSASDAD
501: EQRVKEETGA TIRCFPFEQT QGTKTCLMTG NPAEEVAIFA KSY

Arabidopsis Description

OVA6Proline--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.