CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05739	Canola	cytosol	80.99	82.35
CDX94184	Canola	cytosol, endoplasmic reticulum	80.99	69.5
CDY67326	Canola	cytosol	80.17	65.1
CDY30246	Canola	cytosol	32.23	23.93
KRH16405	Soybean	cytosol	23.14	20.9
CDX67877	Canola	cytosol	66.12	18.31
CDY25091	Canola	cytosol	61.16	16.93
CDX76618	Canola	cytosol	59.5	13.98
TraesCS3A01G419600.1	Wheat	cytosol	57.85	13.86
TraesCS3B01G455000.1	Wheat	cytosol, extracellular, golgi	57.85	13.86
TraesCS3D01G415200.1	Wheat	cytosol, golgi	57.85	13.86
TraesCS7D01G203800.1	Wheat	cytosol	56.2	13.85
Zm00001d053196_P001	Maize	cytosol	57.85	13.78
EES15248	Sorghum	cytosol	57.85	13.78
EES19704	Sorghum	cytosol	57.85	13.78
TraesCS1B01G342200.1	Wheat	cytosol, golgi	57.02	13.66
TraesCS7B01G107300.1	Wheat	cytosol	55.37	13.59
TraesCS1D01G210600.3	Wheat	cytosol	57.02	13.45
HORVU3Hr1G093050.2	Barley	cytosol	57.02	13.45
TraesCS7A01G200500.1	Wheat	cytosol	54.55	13.44
PGSC0003DMT400036645	Potato	cytosol	55.37	13.32
HORVU7Hr1G041110.1	Barley	cytosol	54.55	13.23
PGSC0003DMT400073336	Potato	cytosol	56.2	13.2
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	56.2	13.2
Os12t0443700-01	Rice	cytosol	55.37	13.14
KRG96602	Soybean	cytosol	55.37	13.01
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	55.37	13.01
CDY25092	Canola	cytosol	57.85	12.96
Solyc03g117330.2.1	Tomato	cytosol	53.72	12.9
CDY11404	Canola	cytosol, mitochondrion, plastid, vacuole	59.5	12.88
CDX67878	Canola	cytosol	57.02	12.73
VIT_07s0005g02620.t01	Wine grape	cytosol	53.72	12.6
GSMUA_Achr4P09390_001	Banana	cytosol	52.89	11.64
CDY00534	Canola	cytosol	37.19	11.39
Zm00001d002585_P004	Maize	cytosol	44.63	10.32
CDY27824	Canola	mitochondrion, plastid	37.19	8.41
CDY27062	Canola	plastid	37.19	8.3
CDX91656	Canola	plastid	34.71	8.28
KRH33484	Soybean	plastid	22.31	7.12
CDX74456	Canola	cytosol	16.53	5.95
CDY30241	Canola	cytosol	14.05	4.91
CDY30248	Canola	cytosol	4.13	3.45
HORVU4Hr1G079480.1	Barley	cytosol	0.83	2.86
GSMUA_Achr3P28360_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY33873	EnsemblPlantsGene:GSBRNA2T00055366001	Gene3D:3.30.930.10	PANTHER:PTHR43382	ProteinID:CDY33873	ProteinID:CDY33873.1
SEG:seg	SUPFAM:SSF55681	UniParc:UPI0004EF03A6	UniProt:A0A078HAK8	MapMan:35.1	:

Description

BnaC06g04800DBnaC06g04800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAK8]

Coordinates

chrLK032323:-:289535..290605

Molecular Weight (calculated)

13974.0 Da

IEP (calculated)

8.984

GRAVY (calculated)

-0.424

Length

121 amino acids

Sequence
(BLAST)

001: MIFVIDLELK IKKRKKKIRL RSREFLWQGH TAHATKEDAD KVVLEALDHY RHIYEEYFAV PVVKGMKSEK KFAGARYTTR VEIGVMILTY EDDKGLVNPP
101: NVAPIQVRLS EEGNGLDVCD N

Best Arabidopsis Sequence Match ( AT3G62120.1 )
(BLAST)

001: MADPSEQKEK VVKEKKEKVK KEKVVKEKVA KASSSGQKKK DVKKETGLGL SVKKDENFGE WYSEVCKQDM IEYYDISGCY ILRPWSMAIW EIMQIFFDAE
101: IKKMKVKNCY FPLFVSPGVL EKEKDHIEGF APEVAWVTKS GKSDLEVPIA IRPTSETVMY PYYSKWIRGH RDLPLKLNQW CNVVRWEFSN PTPFIRSREF
201: LWQEGHTAFA TKAEADEEVL QILELYRRIY EEYLAVPVVK GMKSENEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFEINFE NEKAETEMVW
301: QNSWAYSTRT IGVMIMTHGD DKGLVLPPKV ASVQVVVIPV PYKDANTQGI YDACTATASA LCEAGIRAEE DLRDNYSPGW KYSDWEMKGV PLRIEIGPRD
401: LENDQVRTVR RDNGVKEDIP RGSLVEHVKE LLEKIQQNMY EVAKQKREAC VQEVKTWDEF IKALNEKKLI LAPWCDEEEV ERDVKARTKG ETGAAKTLCS
501: PFDQPELPEG TLCFASGKPA KKWTYWGRSY

Arabidopsis Description

Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.