Factsheet for HORVU3Hr1G093050.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G093390.2
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62120.1	HORVU1Hr1G093390.2	AT2G42580.1	19000166
AT3G62120.1	HORVU3Hr1G027650.2	AT2G42580.1	19000166
AT3G62120.1	HORVU3Hr1G054240.2	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G415200.1	Wheat	cytosol, golgi	97.08	98.61
TraesCS1B01G342200.1	Wheat	cytosol, golgi	96.88	98.42
TraesCS3B01G455000.1	Wheat	cytosol, extracellular, golgi	96.88	98.42
TraesCS3A01G419600.1	Wheat	cytosol	96.69	98.22
TraesCS1D01G210600.3	Wheat	cytosol	96.88	96.88
EES19704	Sorghum	cytosol	90.06	90.94
EES15248	Sorghum	cytosol	89.86	90.75
Zm00001d053196_P001	Maize	cytosol	89.28	90.16
HORVU4Hr1G079480.1	Barley	cytosol	6.04	88.57
Os12t0443700-01	Rice	cytosol	87.91	88.43
Zm00001d002585_P004	Maize	cytosol	84.6	82.98
HORVU7Hr1G041110.1	Barley	cytosol	80.31	82.57
PGSC0003DMT400073336	Potato	cytosol	79.73	79.42
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	79.53	79.22
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	78.95	78.64
KRG96602	Soybean	cytosol	78.95	78.64
GSMUA_Achr3P28360_001	Banana	cytosol	17.93	78.63
VIT_07s0005g02620.t01	Wine grape	cytosol	78.56	78.1
CDX76618	Canola	cytosol	78.36	78.06
PGSC0003DMT400036645	Potato	cytosol	76.22	77.73
Bra007663.1-P	Field mustard	cytosol	77.58	77.58
Solyc03g117330.2.1	Tomato	cytosol	76.02	77.38
Bra003487.1-P	Field mustard	cytosol	74.46	76.4
AT3G62120.1	Thale cress	cytosol	77.39	74.91
GSMUA_Achr4P09390_001	Banana	cytosol	79.34	74.0
CDY25092	Canola	cytosol	77.19	73.33
CDX67878	Canola	cytosol	77.0	72.88
Bra003486.1-P	Field mustard	cytosol	64.33	71.58
CDY11404	Canola	cytosol, mitochondrion, plastid, vacuole	77.97	71.56
CDX67877	Canola	cytosol	57.12	67.05
CDY30246	Canola	cytosol	20.47	64.42
CDY30248	Canola	cytosol	18.13	64.14
CDY25091	Canola	cytosol	54.58	64.07
CDY05739	Canola	cytosol	14.43	62.18
KRH16405	Soybean	cytosol	15.98	61.19
Bra017510.1-P	Field mustard	cytosol	17.15	60.69
Bra029197.1-P	Field mustard	cytosol	25.15	59.17
Bra028248.1-P	Field mustard	cytosol	60.43	57.62
CDX94184	Canola	cytosol, endoplasmic reticulum	15.79	57.45
CDY33873	Canola	cytosol	13.45	57.02
Bra008444.1-P	Field mustard	cytosol	16.76	55.84
Bra037949.1-P	Field mustard	mitochondrion	15.98	55.78
CDY67326	Canola	cytosol	16.18	55.7
AT5G10880.1	Thale cress	cytosol	32.55	54.05
Bra037950.1-P	Field mustard	cytosol	12.48	53.33
CDX74456	Canola	cytosol	34.7	52.98
CDY30241	Canola	cytosol	35.28	52.31
HORVU2Hr1G057880.3	Barley	mitochondrion	39.77	37.71
KRH33484	Soybean	plastid	27.29	36.94

Protein Annotations

KEGG:00970+6.1.1.15	MapMan:17.2.17	Gene3D:3.30.110.30	Gene3D:3.30.930.10	Gene3D:3.40.50.800	UniProt:A0A287MB87
InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812
GO:GO:0004827	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006433	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G093050	EnsemblPlants:HORVU3Hr1G093050.2
InterPro:IPR006195	InterPro:IPR017449	InterPro:IPR036621	HAMAP:MF_01571	PFAM:PF00587	PFAM:PF03129
PFAM:PF09180	PRINTS:PR01046	PFscan:PS50862	PANTHER:PTHR43382	PANTHER:PTHR43382:SF2	InterPro:Pro-tRNA-ligase_IIa
InterPro:Pro-tRNA-ligase_IIa_arc-type	InterPro:Pro-tRNA_ligase_II_C	InterPro:Pro-tRNA_synth_II	InterPro:ProRS_core_arch_euk	SMART:SM00946	SUPFAM:SSF52954
SUPFAM:SSF55681	SUPFAM:SSF64586	TIGRFAMs:TIGR00408	UniParc:UPI000B47E799	InterPro:aa-tRNA-synt_IIb	InterPro:aa-tRNA-synth_II
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:640786088..640793553

Molecular Weight (calculated)

58192.7 Da

IEP (calculated)

6.986

GRAVY (calculated)

-0.415

Length

513 amino acids

Sequence
(BLAST)

001: MSTNKGGGEK TNKGGGGGKK KKEVKKETKL GMAYKKDDNF GEWYSEVVVN SEMIEYYDIS GCYILRPWAM EIWELLKEFF DAEIKKLKLK PYYFPLFVTE
101: NVLQKEKDHI EGFAPEVAWV TKSGKSDLEA PIAIRPTSET VMYPYFSKWI RSHRDLPLKC NQWCNVVRWE FSNPTPFIRS REFLWQEGHT VFATKEEADE
201: EVLQILELYR RIYEEFLAVP VSKGRKSEME KFAGGLYTTS VEAFIPNTGR GIQGATSHCL GQNFAKMFDI TFENEKGERS MVWQNSWAYT TRSIGVMVMT
301: HGDDKGLVLP PKVAPIQVIV IPVPFKDADT TAIKGACESA VYTLNQAGIR ADLDARENYS PGWKYSQWEM KGVPLRIEIG PKDLANKQVR IVRRDNGAKV
401: DIPSTDLVEQ VRVLLDGIQA NLLETAKAKR DACIVIISTW DEFIAALNDK KLILAPWCDE EEVEKDVKAR TKGELGAAKT LCTPFDQPDL PSGTVCFASG
501: KPAQKWSFWG RSY

Best Arabidopsis Sequence Match ( AT3G62120.3 )
(BLAST)

001: MADPSEQKEK VVKEKVAKAS SSGQKKKDVK KETGLGLSVK KDENFGEWYS EVCKQDMIEY YDISGCYILR PWSMAIWEIM QIFFDAEIKK MKVKNCYFPL
101: FVSPGVLEKE KDHIEGFAPE VAWVTKSGKS DLEVPIAIRP TSETVMYPYY SKWIRGHRDL PLKLNQWCNV VRWEFSNPTP FIRSREFLWQ EGHTAFATKA
201: EADEEVLQIL ELYRRIYEEY LAVPVVKGMK SENEKFAGGL YTTSVEAFIP NTGRGVQGAT SHCLGQNFAK MFEINFENEK AETEMVWQNS WAYSTRTIGV
301: MIMTHGDDKG LVLPPKVASV QVVVIPVPYK DANTQGIYDA CTATASALCE AGIRAEEDLR DNYSPGWKYS DWEMKGVPLR IEIGPRDLEN DQVRTVRRDN
401: GVKEDIPRGS LVEHVKELLE KIQQNMYEVA KQKREACVQE VKTWDEFIKA LNEKKLILAP WCDEEEVERD VKARTKGETG AAKTLCSPFD QPELPEGTLC
501: FASGKPAKKW TYWGRSY

Arabidopsis Description

Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.