Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30248 | Canola | cytosol | 33.33 | 71.03 |
| Bra017510.1-P | Field mustard | cytosol | 31.72 | 67.59 |
| Bra029197.1-P | Field mustard | cytosol | 44.98 | 63.76 |
| CDX74456 | Canola | cytosol | 57.93 | 53.27 |
| CDY30241 | Canola | cytosol | 56.63 | 50.58 |
| PGSC0003DMT400036645 | Potato | cytosol | 56.31 | 34.59 |
| PGSC0003DMT400073336 | Potato | cytosol | 57.28 | 34.37 |
| Bra028248.1-P | Field mustard | cytosol | 59.55 | 34.2 |
| Solyc03g117330.2.1 | Tomato | cytosol | 55.66 | 34.13 |
| Solyc06g068320.2.1 | Tomato | cytosol, extracellular, nucleus | 56.63 | 33.98 |
| AT3G62120.1 | Thale cress | cytosol | 58.25 | 33.96 |
| KRG96602 | Soybean | cytosol | 55.34 | 33.2 |
| VIT_07s0005g02620.t01 | Wine grape | cytosol | 55.34 | 33.14 |
| KRH68339 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 55.02 | 33.01 |
| TraesCS3D01G415200.1 | Wheat | cytosol, golgi | 53.72 | 32.87 |
| TraesCS3B01G455000.1 | Wheat | cytosol, extracellular, golgi | 53.72 | 32.87 |
| TraesCS3A01G419600.1 | Wheat | cytosol | 53.72 | 32.87 |
| TraesCS1B01G342200.1 | Wheat | cytosol, golgi | 53.72 | 32.87 |
| EES15248 | Sorghum | cytosol | 53.72 | 32.68 |
| HORVU3Hr1G093050.2 | Barley | cytosol | 54.05 | 32.55 |
| Zm00001d053196_P001 | Maize | cytosol | 53.4 | 32.48 |
| EES19704 | Sorghum | cytosol | 53.07 | 32.28 |
| TraesCS1D01G210600.3 | Wheat | cytosol | 53.4 | 32.16 |
| Os12t0443700-01 | Rice | cytosol | 52.43 | 31.76 |
| Zm00001d002585_P004 | Maize | cytosol | 53.4 | 31.55 |
| TraesCS7A01G200500.1 | Wheat | cytosol | 49.19 | 30.96 |
| GSMUA_Achr4P09390_001 | Banana | cytosol | 54.05 | 30.36 |
| TraesCS7B01G107300.1 | Wheat | cytosol | 48.22 | 30.22 |
| TraesCS7D01G203800.1 | Wheat | cytosol | 47.9 | 30.14 |
| HORVU7Hr1G041110.1 | Barley | cytosol | 48.22 | 29.86 |
| HORVU4Hr1G079480.1 | Barley | cytosol | 3.24 | 28.57 |
| AT5G52520.1 | Thale cress | plastid | 29.77 | 16.94 |
| KRH16405 | Soybean | cytosol | 4.53 | 10.45 |
| GSMUA_Achr3P28360_001 | Banana | cytosol | 3.24 | 8.55 |
| KRH33484 | Soybean | plastid | 9.71 | 7.92 |
| CDY30246 | Canola | cytosol | 0.65 | 1.23 |
Protein Annotations
| KEGG:00970+6.1.1.15 | Gene3D:3.30.110.30 | Gene3D:3.30.930.10 | Gene3D:3.40.50.800 | MapMan:35.1 | EntrezGene:830955 |
| ProteinID:AED91605.1 | ArrayExpress:AT5G10880 | EnsemblPlantsGene:AT5G10880 | RefSeq:AT5G10880 | TAIR:AT5G10880 | RefSeq:AT5G10880-TAIR-G |
| EnsemblPlants:AT5G10880.1 | TAIR:AT5G10880.1 | InterPro:Anticodon-bd | InterPro:Anticodon-bd_dom_sf | Unigene:At.54805 | ProteinID:CAB96843.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004812 | GO:GO:0004827 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006412 | GO:GO:0006433 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016874 | GO:GO:0019538 | InterPro:IPR017449 | InterPro:IPR036621 | RefSeq:NP_196649.1 | PFAM:PF03129 |
| PFAM:PF09180 | PANTHER:PTHR43382 | PANTHER:PTHR43382:SF2 | InterPro:Pro-tRNA_ligase_II_C | InterPro:Pro-tRNA_synth_II | UniProt:Q9LEV2 |
| SMART:SM00946 | SUPFAM:SSF52954 | SUPFAM:SSF64586 | UniParc:UPI00000A15D4 | SEG:seg | : |
Description
Uncharacterized protein T30N20_150 [Source:UniProtKB/TrEMBL;Acc:Q9LEV2]
Coordinates
chr5:+:3432693..3433867
Molecular Weight (calculated)
34584.2 Da
IEP (calculated)
4.995
GRAVY (calculated)
-0.510
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKETRLGIT AKKDEDFGKW YSEACRFGEL VEYYESVKGC YILKPSGISD EYLERYTNTT LKGLLQRLLG LQELVDKRTQ GPPFEAACMT HGDDKGLVFP
101: PKVAPVQVVV IHVPIKGAAD YQELCDACEA VESTLLGAGI RAEADIRDNY SCGWKYADQE LTGVPLRIET GPRDLANDQV RIVTRDNGAK MDVKRGDLIE
201: QVKDLLEKIQ SNLYDVAKRK VEECTQKVET WDEFVEALSQ KKLILAPWCD KVEVEKDVKR RTRGDETGGG GGGAKTLCTP LEQPELGEET LCFASGKPAK
301: KWSYWGRSY
101: PKVAPVQVVV IHVPIKGAAD YQELCDACEA VESTLLGAGI RAEADIRDNY SCGWKYADQE LTGVPLRIET GPRDLANDQV RIVTRDNGAK MDVKRGDLIE
201: QVKDLLEKIQ SNLYDVAKRK VEECTQKVET WDEFVEALSQ KKLILAPWCD KVEVEKDVKR RTRGDETGGG GGGAKTLCTP LEQPELGEET LCFASGKPAK
301: KWSYWGRSY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.