Factsheet for Bra017510.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029197.1-P	Field mustard	cytosol	99.31	66.06
CDY30241	Canola	cytosol	91.03	38.15
AT5G10880.1	Thale cress	cytosol	67.59	31.72
Bra028248.1-P	Field mustard	cytosol	93.1	25.09
Bra003486.1-P	Field mustard	cytosol	67.59	21.26
Bra007663.1-P	Field mustard	cytosol	66.9	18.91
Solyc03g117330.2.1	Tomato	cytosol	63.45	18.25
PGSC0003DMT400036645	Potato	cytosol	62.76	18.09
PGSC0003DMT400073336	Potato	cytosol	64.14	18.06
Zm00001d053196_P001	Maize	cytosol	62.07	17.72
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	62.76	17.67
KRG96602	Soybean	cytosol	62.76	17.67
Os12t0443700-01	Rice	cytosol	62.07	17.65
EES15248	Sorghum	cytosol	61.38	17.52
TraesCS7A01G200500.1	Wheat	cytosol	59.31	17.52
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	62.07	17.48
TraesCS3B01G455000.1	Wheat	cytosol, extracellular, golgi	60.69	17.43
TraesCS3A01G419600.1	Wheat	cytosol	60.69	17.43
TraesCS3D01G415200.1	Wheat	cytosol, golgi	60.69	17.43
TraesCS7B01G107300.1	Wheat	cytosol	58.62	17.24
HORVU7Hr1G041110.1	Barley	cytosol	59.31	17.23
TraesCS1B01G342200.1	Wheat	cytosol, golgi	60.0	17.23
HORVU3Hr1G093050.2	Barley	cytosol	60.69	17.15
EES19704	Sorghum	cytosol	60.0	17.13
TraesCS7D01G203800.1	Wheat	cytosol	57.93	17.11
TraesCS1D01G210600.3	Wheat	cytosol	60.0	16.96
VIT_07s0005g02620.t01	Wine grape	cytosol	60.0	16.86
Zm00001d002585_P004	Maize	cytosol	60.69	16.83
GSMUA_Achr4P09390_001	Banana	cytosol	62.76	16.55
Bra003487.1-P	Field mustard	cytosol	54.48	15.8
Bra022597.1-P	Field mustard	plastid	34.48	9.23
Bra028313.1-P	Field mustard	cytosol	25.52	9.07
Bra037950.1-P	Field mustard	cytosol	4.14	5.0
Bra037949.1-P	Field mustard	mitochondrion	3.45	3.4
Bra008444.1-P	Field mustard	cytosol	3.45	3.25
KRH33484	Soybean	plastid	8.28	3.17
KRH16405	Soybean	cytosol	0.0	0.0
HORVU4Hr1G079480.1	Barley	cytosol	0.0	0.0
GSMUA_Achr3P28360_001	Banana	cytosol	0.0	0.0

Protein Annotations

KEGG:00970+6.1.1.15	Gene3D:3.30.110.30	Gene3D:3.40.50.800	MapMan:35.1	InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf
EnsemblPlantsGene:Bra017510	EnsemblPlants:Bra017510.1	EnsemblPlants:Bra017510.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004827	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006433	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR017449	InterPro:IPR036621	UniProt:M4DLX9
PFAM:PF03129	PFAM:PF09180	PANTHER:PTHR43382	PANTHER:PTHR43382:SF2	InterPro:Pro-tRNA_ligase_II_C	InterPro:Pro-tRNA_synth_II
SMART:SM00946	SUPFAM:SSF52954	SUPFAM:SSF64586	UniParc:UPI000254243D	SEG:seg	:

Description

AT5G10880 (E=4e-050) | tRNA synthetase-related / tRNA ligase-related

Coordinates

chrA09:+:15877669..15878106

Molecular Weight (calculated)

16872.3 Da

IEP (calculated)

6.703

GRAVY (calculated)

-0.713

Length

145 amino acids

Sequence
(BLAST)

001: MKGVPLRIEL GSKDLEKNQV RVVRRDTGVK MDVIRVDLVE RVKGLMEEIQ RDLYVVAKRK LEESIQKVET WDEFKEALRQ KKLVLAPWCD EVEVENDVKE
101: NSKGENEAGA KTLCTPFEQP ELREDTLCFA SGKPAKKWTY WGRSY

Best Arabidopsis Sequence Match ( AT3G62120.1 )
(BLAST)

001: MADPSEQKEK VVKEKKEKVK KEKVVKEKVA KASSSGQKKK DVKKETGLGL SVKKDENFGE WYSEVCKQDM IEYYDISGCY ILRPWSMAIW EIMQIFFDAE
101: IKKMKVKNCY FPLFVSPGVL EKEKDHIEGF APEVAWVTKS GKSDLEVPIA IRPTSETVMY PYYSKWIRGH RDLPLKLNQW CNVVRWEFSN PTPFIRSREF
201: LWQEGHTAFA TKAEADEEVL QILELYRRIY EEYLAVPVVK GMKSENEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFEINFE NEKAETEMVW
301: QNSWAYSTRT IGVMIMTHGD DKGLVLPPKV ASVQVVVIPV PYKDANTQGI YDACTATASA LCEAGIRAEE DLRDNYSPGW KYSDWEMKGV PLRIEIGPRD
401: LENDQVRTVR RDNGVKEDIP RGSLVEHVKE LLEKIQQNMY EVAKQKREAC VQEVKTWDEF IKALNEKKLI LAPWCDEEEV ERDVKARTKG ETGAAKTLCS
501: PFDQPELPEG TLCFASGKPA KKWTYWGRSY

Arabidopsis Description

Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.