Factsheet for Bra022597.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27062	Canola	plastid	99.45	99.45
AT5G52520.1	Thale cress	plastid	92.8	92.63
GSMUA_Achr7P07770_001	Banana	cytosol	2.58	87.5
VIT_16s0050g00960.t01	Wine grape	cytosol	71.59	86.61
GSMUA_Achr5P23600_001	Banana	cytosol	69.19	83.71
Os07t0165000-01	Rice	cytosol, mitochondrion, plastid	55.54	79.84
KRH38393	Soybean	plastid	78.04	77.47
EER95900	Sorghum	mitochondrion	75.46	77.17
KRH08879	Soybean	plastid	77.68	77.11
Bra028313.1-P	Field mustard	cytosol	57.75	76.72
Zm00001d018870_P001	Maize	plastid	75.46	76.16
PGSC0003DMT400070798	Potato	plastid	75.83	75.14
Solyc01g096870.2.1	Tomato	plastid	75.46	74.77
TraesCS2A01G246200.1	Wheat	mitochondrion	73.99	74.12
TraesCS2D01G248600.1	Wheat	mitochondrion	73.99	74.12
TraesCS2B01G270500.1	Wheat	mitochondrion	73.43	73.57
HORVU2Hr1G057880.3	Barley	mitochondrion	73.25	73.38
GSMUA_Achr7P07780_001	Banana	cytosol	16.42	60.54
Bra003486.1-P	Field mustard	cytosol	35.06	41.21
Bra007663.1-P	Field mustard	cytosol	37.27	39.38
Bra003487.1-P	Field mustard	cytosol	35.98	39.0
Bra008444.1-P	Field mustard	cytosol	10.89	38.31
Bra029197.1-P	Field mustard	cytosol	14.94	37.16
Bra028248.1-P	Field mustard	cytosol	36.53	36.8
Bra037949.1-P	Field mustard	mitochondrion	9.59	35.37
Bra017510.1-P	Field mustard	cytosol	9.23	34.48
Bra037950.1-P	Field mustard	cytosol	7.38	33.33

Protein Annotations

KEGG:00970+6.1.1.15	MapMan:17.2.17	Gene3D:3.30.110.30	Gene3D:3.30.930.10	Gene3D:3.40.50.800	InterPro:Anticodon-bd
InterPro:Anticodon-bd_dom_sf	EnsemblPlantsGene:Bra022597	EnsemblPlants:Bra022597.1	EnsemblPlants:Bra022597.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004812	GO:GO:0004827	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418
GO:GO:0006433	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
InterPro:IPR006195	InterPro:IPR017449	InterPro:IPR036621	UniProt:M4E1E9	HAMAP:MF_01571	PFAM:PF00587
PFAM:PF03129	PFAM:PF09180	PRINTS:PR01046	PFscan:PS50862	PANTHER:PTHR43382	PANTHER:PTHR43382:SF3
InterPro:Pro-tRNA-ligase_IIa	InterPro:Pro-tRNA-ligase_IIa_arc-type	InterPro:Pro-tRNA_ligase_II_C	InterPro:Pro-tRNA_synth_II	InterPro:ProRS_core_arch_euk	SMART:SM00946
SUPFAM:SSF52954	SUPFAM:SSF55681	SUPFAM:SSF64586	TIGRFAMs:TIGR00408	UniParc:UPI0002546FC7	InterPro:aa-tRNA-synt_IIb
InterPro:aa-tRNA-synth_II	SEG:seg	:	:	:	:

Description

AT5G52520 (E=1e-290) OVA6, PRORS1 | OVA6 (OVULE ABORTION 6); ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / proline-tRNA ligase

Coordinates

chrA02:-:8630876..8633796

Molecular Weight (calculated)

60661.1 Da

IEP (calculated)

6.530

GRAVY (calculated)

-0.325

Length

542 amino acids

Sequence
(BLAST)

001: MVASLRLPSL TSLLFPATTR YPAALRRSLC LRNRPASGFA TAPSGTASPE TKSEVGRLPR SDQAVTPRSQ DFNAWYLDVI ASAELADYGP VRGTMVIRPY
101: GYAIWEAIQD YLNVKFKETG HSNMYFPQFI PYSFIEKEAS HVEGFSPELA LVTVGGGNEL EEKLVVRPTS ETIVNHMFTQ WIHSYRDLPL MINQWANVTR
201: WEMRTKPFIR TLEFLWQEGH TAHATPEEAE KEAKQMIEIY TRFAFEETAI PVIAGRKSKM ETFAGADTTY TIEAMMGDRK ALQAGTSHHL GQNFSRAFGT
301: QFQDENGERQ HVWQTSWAVS TRFVGGIIMT HGDDTGLMLP PKIAPIQVVI VPIWKKDSEK TEVLNAASSV KEVLQTAGVR VKLDDTTERT AGWKFNFWEM
401: KGVPIRIEIG PRDVSNNSVV VSRRDIPGKA GKVFGISMEP STLVAYVKEK LDEIQSSLLE KAISFRDSNI VDVNSYEELK AAISSGKWAR GPWSASDSDE
501: QRVKEETGAT IRCFPFEQTL GNKTCLMTGN PAEEVAIFAK SY

Best Arabidopsis Sequence Match ( AT5G52520.1 )
(BLAST)

001: MVSSSLRLPS LTSLLFPATT RYPATLRRTV CLRNRPLSGF ATAPSGTASP ETKSSEVDRL RSDRAVTPRS QDFNAWYLDV IASAELADYG PVRGTMVIRP
101: YGYAIWEAIQ DYLNVKFKET GHSNMYFPQF IPYSFIEKEA SHVEGFSPEL ALVTVGGGKE LEEKLVVRPT SETIVNHMFT QWIHSYRDLP LMINQWANVT
201: RWEMRTKPFI RTLEFLWQEG HTAHATPEEA EKEAKQMIEI YTRFAFEQTA IPVIPGRKSK LETFAGADIT YTIEAMMGDR KALQAGTSHN LGQNFSRAFG
301: TQFADENGER QHVWQTSWAV STRFVGGIIM THGDDTGLML PPKIAPIQVV IVPIWKKDTE KTGVLSAASS VKEALQTAGV RVKLDDTDQR TPGWKFNFWE
401: MKGIPLRIEI GPRDVSSNSV VVSRRDVPGK AGKVFGISME PSTLVAYVKE KLDEIQTSLL EKALSFRDSN IVDVNSYAEL KDAISSGKWA RGPWSASDAD
501: EQRVKEETGA TIRCFPFEQT QGTKTCLMTG NPAEEVAIFA KSY

Arabidopsis Description

OVA6Proline--tRNA ligase, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.