Factsheet for Bra037950.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008444.1-P	Field mustard	cytosol	91.67	71.43
Bra037949.1-P	Field mustard	mitochondrion	80.83	65.99
Bra003486.1-P	Field mustard	cytosol	63.33	16.49
Bra007663.1-P	Field mustard	cytosol	56.67	13.26
Bra003487.1-P	Field mustard	cytosol	55.0	13.2
TraesCS3D01G415200.1	Wheat	cytosol, golgi	54.17	12.87
TraesCS3B01G455000.1	Wheat	cytosol, extracellular, golgi	54.17	12.87
TraesCS3A01G419600.1	Wheat	cytosol	54.17	12.87
Zm00001d053196_P001	Maize	cytosol	54.17	12.8
EES19704	Sorghum	cytosol	54.17	12.8
EES15248	Sorghum	cytosol	54.17	12.8
TraesCS1B01G342200.1	Wheat	cytosol, golgi	53.33	12.67
TraesCS7D01G203800.1	Wheat	cytosol	51.67	12.63
KRH68339	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	54.17	12.62
KRG96602	Soybean	cytosol	54.17	12.62
HORVU3Hr1G093050.2	Barley	cytosol	53.33	12.48
TraesCS1D01G210600.3	Wheat	cytosol	53.33	12.48
Zm00001d002585_P004	Maize	cytosol	54.17	12.43
HORVU7Hr1G041110.1	Barley	cytosol	51.67	12.42
TraesCS7A01G200500.1	Wheat	cytosol	50.83	12.42
TraesCS7B01G107300.1	Wheat	cytosol	50.83	12.37
PGSC0003DMT400036645	Potato	cytosol	51.67	12.33
PGSC0003DMT400073336	Potato	cytosol	52.5	12.23
Solyc06g068320.2.1	Tomato	cytosol, extracellular, nucleus	52.5	12.23
VIT_07s0005g02620.t01	Wine grape	cytosol	52.5	12.21
GSMUA_Achr4P09390_001	Banana	cytosol	55.83	12.18
Os12t0443700-01	Rice	cytosol	51.67	12.16
Solyc03g117330.2.1	Tomato	cytosol	50.83	12.1
Bra028248.1-P	Field mustard	cytosol	48.33	10.78
Bra028313.1-P	Field mustard	cytosol	32.5	9.56
Bra029197.1-P	Field mustard	cytosol	15.83	8.72
KRH16405	Soybean	cytosol	9.17	8.21
Bra022597.1-P	Field mustard	plastid	33.33	7.38
KRH33484	Soybean	plastid	20.0	6.33
Bra017510.1-P	Field mustard	cytosol	5.0	4.14
HORVU4Hr1G079480.1	Barley	cytosol	0.0	0.0
GSMUA_Achr3P28360_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra037950.1	EnsemblPlants:Bra037950.1-P	EnsemblPlantsGene:Bra037950	Gene3D:3.30.930.10	PANTHER:PTHR43382	UniParc:UPI00025449EB
UniProt:M4FA36	MapMan:35.1	:	:	:	:

Description

AT3G62120 (E=2e-010) | tRNA synthetase class II (G, H, P and S) family protein

Coordinates

chrA10:-:393975..394873

Molecular Weight (calculated)

13485.4 Da

IEP (calculated)

9.030

GRAVY (calculated)

-0.150

Length

120 amino acids

Sequence
(BLAST)

001: MFRQMVLEAL DHYRHIYEEY FAVPVVKGMK SEKKFAGARY TTSVEKLVVV YKVQRCLTSH SQIKKEKVKG VANSWAYSAI TIGVMILTYG DDKGLVNPPN
101: VAPIQVRLSE EGNGLDVCDS

Best Arabidopsis Sequence Match ( AT3G62120.1 )
(BLAST)

001: MADPSEQKEK VVKEKKEKVK KEKVVKEKVA KASSSGQKKK DVKKETGLGL SVKKDENFGE WYSEVCKQDM IEYYDISGCY ILRPWSMAIW EIMQIFFDAE
101: IKKMKVKNCY FPLFVSPGVL EKEKDHIEGF APEVAWVTKS GKSDLEVPIA IRPTSETVMY PYYSKWIRGH RDLPLKLNQW CNVVRWEFSN PTPFIRSREF
201: LWQEGHTAFA TKAEADEEVL QILELYRRIY EEYLAVPVVK GMKSENEKFA GGLYTTSVEA FIPNTGRGVQ GATSHCLGQN FAKMFEINFE NEKAETEMVW
301: QNSWAYSTRT IGVMIMTHGD DKGLVLPPKV ASVQVVVIPV PYKDANTQGI YDACTATASA LCEAGIRAEE DLRDNYSPGW KYSDWEMKGV PLRIEIGPRD
401: LENDQVRTVR RDNGVKEDIP RGSLVEHVKE LLEKIQQNMY EVAKQKREAC VQEVKTWDEF IKALNEKKLI LAPWCDEEEV ERDVKARTKG ETGAAKTLCS
501: PFDQPELPEG TLCFASGKPA KKWTYWGRSY

Arabidopsis Description

Proline--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M1R2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.